Analysis of enzymatically released peptides by reverse-phase high performance liquid chromatography from picomole amounts of apolipoproteins separated on polyacrylamide isoelectric focusing gels.

L V Pereira, P J Dolphin
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Abstract

Methods were developed for the peptide analysis of individual isoproteins of human apolipoproteins separated on urea-polyacrylamide isoelectric focusing (IEF) gels. After IEF the proteins were fixed in the gel matrix by trichloroacetic acid precipitation. Low molecular weight contaminants, including ampholytes, were removed and the proteins were chemically desialylated. Enzymatic digestions with L-1-tosyl-2-phenylethylchloromethyl ketone - trypsin, chymotrypsin, or with thermolysin were accomplished within the gel matrix. The proteolytically released peptides were analyzed by reverse-phase high performance liquid chromatography. These methods facilitated the comprehensive analysis of protein structural differences between individual isoproteins of apolipoproteins in duplicate with as little as 1-2 nmol of each isoprotein, without the use of radiolabels. Human apolipoproteins A-I, C, and E were analysed by these methods.

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用聚丙烯酰胺等电聚焦凝胶分离载脂蛋白,用反相高效液相色谱法分析酶解肽。
建立了用尿素-聚丙烯酰胺等电聚焦(IEF)凝胶分离的人载脂蛋白中单个同工蛋白的多肽分析方法。IEF后,用三氯乙酸沉淀法将蛋白固定在凝胶基质中。低分子量污染物(包括两性水解物)被去除,蛋白质被化学去盐化。用l- 1-甲酰基-2-苯基乙基氯甲基酮-胰蛋白酶、凝乳胰蛋白酶或热溶酶在凝胶基质内完成酶消化。采用反相高效液相色谱法对蛋白水解释放肽进行分析。这些方法有助于在不使用放射性标记的情况下,对载脂蛋白单个同工蛋白之间的蛋白质结构差异进行综合分析,每个同工蛋白只需1-2 nmol。用这些方法分析人载脂蛋白A-I、C和E。
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