Phylogenetic Resolution of Morchella, Verpa, and Disciotis [Pezizales: Morchellaceae] Based on Restriction Enzyme Analysis of the 28S Ribosomal RNA Gene

Britt A. Bunyard, Michael S. Nicholson, Daniel J. Royse
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引用次数: 28

Abstract

Bunyard, B. A., Nicholson, M. S. and Royse, D. J. 1995. Phylogenetic resolution of Morchella, Verpa, and Disciotis [Pezizales: Morchellaceae] based on restriction enzyme analysis of the 28S ribosomal RNA gene. Experimental Mycology 19, 223-233. The large subunit (28S) of the ribosomal DNA repeat of Morchella, Verpa, and Disciotis and a closely related genus (Gyromitra) was enzymatically amplified via the polymerase chain reaction. Restriction fragment length polymorphisms were found among the lines investigated and used to infer phylogenetic relationships. More variability was observed toward the 5′ end than toward the 3′ end of the 28S rRNA gene. The RFLP data were used to assemble a phylogenetic tree for the taxonomic group. Based on the RFLP data three black Morchella species isolates differed by approximately 0.5, 1.0, and 1.5%, respectively, from all other isolates in the Morchellaceae examined in this study. Gyromitra gigas , used as an outgroup, had approximately 6.2% difference from all members of the Morchellaceae. In some cases more genetic variation was observed intraspecifically than between putative species. Additionally, the hypothesis that Morchella is composed of only a few (possibly three) polymorphic species was supported by our findings.

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基于28S核糖体RNA基因限制性内切酶分析的羊肚菌、羊肚菌和盘盘菌的系统发育分析
Bunyard, b.a., Nicholson, m.s.和Royse, d.j. 1995。基于28S核糖体RNA基因限制性内切酶分析的羊肚菌、羊肚菌和盘盘菌的系统发育分析[Pezizales: Morchellaceae]真菌学通报,2009,23- 29。Morchella, Verpa和disotis以及一个密切相关的属(Gyromitra)的核糖体DNA重复序列的大亚基(28S)通过聚合酶链反应被酶扩增。限制性内切片段长度多态性在被调查的品系中被发现,并被用来推断系统发育关系。28S rRNA基因的5′端比3′端有更多的变异。利用RFLP数据为该分类群构建系统发育树。根据RFLP数据,三种黑色羊肚菌分离株与本研究中检测的羊肚菌科所有其他分离株分别差异约0.5,1.0和1.5%。作为外群的gigas Gyromitra与羊肚菌科所有成员的差异约为6.2%。在某些情况下,种内的遗传变异比假定的种间的遗传变异要多。此外,我们的研究结果支持了羊肚菌仅由少数(可能是三个)多态物种组成的假设。
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