Interaction with DNA of oligopeptides related to the Arc repressor.

Peptide research Pub Date : 1996-01-01
N Helbecque, A el Idrissi Boutaher, J P Hénichart
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Abstract

Three different peptides, A13, A14x2 and A20, related to the Arc repressor from Salmonella phage P22, were synthesized. They all contained the 13 N-terminal residues of Arc known to form a beta-sheet interacting with the operator OArc. In the case of A20, the tripeptide Lys-Trp-Lys was added in the C-terminal position because of its propensity to increase affinity to DNA. The interaction of the three peptides with OArc and with other related (OMnt from the same phage) and unrelated oligonucleotides was followed using circular dichroism, filter binding assays and DNaseI protection experiments. While Kd = 10(-9) M for the protein, 8.7 x 10(-5) M and 7.7 x 10(-6) M Kd values were obtained for A14x2 and A20 interacting with OArc.

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与Arc抑制因子相关的寡肽DNA的相互作用。
从沙门氏菌噬菌体P22中合成了与Arc抑制因子相关的3种多肽A13、A14x2和A20。它们都含有13个已知的Arc的n端残基,形成与OArc操作者相互作用的β -片。在A20的例子中,在c端位置添加了三肽Lys-Trp-Lys,因为它倾向于增加对DNA的亲和力。利用圆二色性、滤镜结合实验和DNaseI保护实验,观察这三种肽与OArc以及其他相关(来自同一噬菌体的OMnt)和不相关的寡核苷酸的相互作用。与OArc相互作用的A14x2和A20的Kd值分别为8.7 × 10(-5) M和7.7 × 10(-6) M。
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