{"title":"Search the Human cDNA Database at TIGR.","authors":"L Cocea","doi":"10.1093/bioinformatics/13.2.201","DOIUrl":null,"url":null,"abstract":"<p><strong>Motivation: </strong>The Human cDNA Database (HCD) at the Institute for Genomic Research (TIGR) is the most complete, non-redundant and structured collection of human expressed DNA sequences available to date. Sequences and other data can be retrieved by users having opened an account at HCD/TIGR. A HCD search involves composing and sending queries one by one and this can become time consuming if many queries must be sent. Moreover, a large amount of time is required thereafter to process the results.</p><p><strong>Results: </strong>The HCDSearch system described here automatically composes and sends the queries by e-mail using information provided in a text file; it also greatly accelerates the processing of results, generating lists of HCD numbers and library identifiers in a format that renders them very easy to examine. The programs run on Unix platforms.</p>","PeriodicalId":77081,"journal":{"name":"Computer applications in the biosciences : CABIOS","volume":"13 2","pages":"201-4"},"PeriodicalIF":0.0000,"publicationDate":"1997-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1093/bioinformatics/13.2.201","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer applications in the biosciences : CABIOS","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/bioinformatics/13.2.201","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Motivation: The Human cDNA Database (HCD) at the Institute for Genomic Research (TIGR) is the most complete, non-redundant and structured collection of human expressed DNA sequences available to date. Sequences and other data can be retrieved by users having opened an account at HCD/TIGR. A HCD search involves composing and sending queries one by one and this can become time consuming if many queries must be sent. Moreover, a large amount of time is required thereafter to process the results.
Results: The HCDSearch system described here automatically composes and sends the queries by e-mail using information provided in a text file; it also greatly accelerates the processing of results, generating lists of HCD numbers and library identifiers in a format that renders them very easy to examine. The programs run on Unix platforms.
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