A matrix associated region localizes the human SOCS-1 gene to chromosome 16p13.13.

J A Kramer, M D Adams, G B Singh, N A Doggett, S A Krawetz
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引用次数: 14

Abstract

The MarFinder algorithm was applied to a newly sequenced segment of 16p13.13 abutting the 3' end of the human PRM1-->PRM2-->TNP2 locus. A candidate region of matrix attached was identified. Subsequent biophysical analysis showed that this region was attached to the somatic nuclear matrix. Nucleotide sequence analysis also revealed the presence of a CpG island. Data base queries showed that this region contained the SOCS-1 gene. Thus, the SOCS-1 gene is bounded by a somatic MAR and is just 3' of the spermatid-expressed PRM1-->PRM2-->TNP2 domain at position 16p13.13.

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人类SOCS-1基因位于染色体16p13.13的基质相关区域。
将MarFinder算法应用于16p13.13中靠近人类PRM1- >PRM2- >TNP2位点3'端的新测序片段。确定了矩阵附加的候选区域。随后的生物物理分析表明,该区域附着在体细胞核基质上。核苷酸序列分析也显示CpG岛的存在。数据库查询显示该区域含有SOCS-1基因。因此,SOCS-1基因由体细胞MAR结合,位于精子表达的PRM1- >PRM2- >TNP2结构域的3'位置16p13.13。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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