A M Sambor, M S Pombo de Oliveira, A Farhadi, J K Carr, S M Carvalho, W A Blattner, J H Kim
{"title":"Human T-lymphotropic virus type I tax polymorphisms in a transmission cohort: no association between sequence variation and disease manifestations.","authors":"A M Sambor, M S Pombo de Oliveira, A Farhadi, J K Carr, S M Carvalho, W A Blattner, J H Kim","doi":"","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>To determine whether a unique human T-lymphotropic virus type I (HTLV-I) transmission cohort containing multiple disease manifestations could be used to establish a relationship between tax gene sequence and HTLV disease expression.</p><p><strong>Methods: </strong>DNA was extracted from the peripheral blood mononuclear cells (PBMC) of the HTLV-infected persons in the cohort. A 1.1-kb fragment of tax was amplified by polymerase chain reaction (PCR) and cloned. Six to 12 individual clones were sequenced per person.</p><p><strong>Results: </strong>Comparison to a reference ATK strain showed numerous differences; however, consensus tax sequences from all persons within the transmission cohort were identical. Intraperson variation was 0.1% to 0.3%. Tax sequences from the index case did not differ from those obtained from a transfusion recipient who developed tropical spastic paraparesis/HTLV-I-associated myelopathy (TSP/HAM). Tax sequences from the same index case did not differ from sequences obtained from the asymptomatic or ATL phases of a second recipient.</p><p><strong>Conclusions: </strong>In this cohort there did not appear to be tax genotypes associated with specific disease manifestations of HTLV infection.</p>","PeriodicalId":80032,"journal":{"name":"Journal of human virology","volume":"2 5","pages":"308-14"},"PeriodicalIF":0.0000,"publicationDate":"1999-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of human virology","FirstCategoryId":"1085","ListUrlMain":"","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Objective: To determine whether a unique human T-lymphotropic virus type I (HTLV-I) transmission cohort containing multiple disease manifestations could be used to establish a relationship between tax gene sequence and HTLV disease expression.
Methods: DNA was extracted from the peripheral blood mononuclear cells (PBMC) of the HTLV-infected persons in the cohort. A 1.1-kb fragment of tax was amplified by polymerase chain reaction (PCR) and cloned. Six to 12 individual clones were sequenced per person.
Results: Comparison to a reference ATK strain showed numerous differences; however, consensus tax sequences from all persons within the transmission cohort were identical. Intraperson variation was 0.1% to 0.3%. Tax sequences from the index case did not differ from those obtained from a transfusion recipient who developed tropical spastic paraparesis/HTLV-I-associated myelopathy (TSP/HAM). Tax sequences from the same index case did not differ from sequences obtained from the asymptomatic or ATL phases of a second recipient.
Conclusions: In this cohort there did not appear to be tax genotypes associated with specific disease manifestations of HTLV infection.