Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model.

IF 5.9 Q1 Computer Science Journal of Healthcare Informatics Research Pub Date : 2021-01-01 Epub Date: 2021-02-27 DOI:10.1007/s41666-021-00093-9
Yijun Shao, Ali Ahmed, Angelike P Liappis, Charles Faselis, Stuart J Nelson, Qing Zeng-Treitler
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引用次数: 5

Abstract

This study was to understand the impacts of three key demographic variables, age, gender, and race, on the adverse outcome of all-cause hospitalization or all-cause mortality in patients with COVID-19, using a deep neural network (DNN) analysis. We created a cohort of Veterans who were tested positive for COVID-19, extracted data on age, gender, and race, and clinical characteristics from their electronic health records, and trained a DNN model for predicting the adverse outcome. Then, we analyzed the association of the demographic variables with the risks of the adverse outcome using the impact scores and interaction scores for explaining DNN models. The results showed that, on average, older age and African American race were associated with higher risks while female gender was associated with lower risks. However, individual-level impact scores of age showed that age was a more impactful risk factor in younger patients and in older patients with fewer comorbidities. The individual-level impact scores of gender and race variables had a wide span covering both positive and negative values. The interaction scores between the demographic variables showed that the interaction effects were minimal compared to the impact scores associated with them. In conclusion, the DNN model is able to capture the non-linear relationship between the risk factors and the adverse outcome, and the impact scores and interaction scores can help explain the complicated non-linear effects between the demographic variables and the risk of the outcome.

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了解COVID-19患者不良结局的人口统计学风险因素:对深度学习模型的解释。
本研究旨在通过深度神经网络(DNN)分析,了解年龄、性别和种族这三个关键人口统计学变量对COVID-19患者全因住院或全因死亡率的不良结局的影响。我们创建了一组COVID-19检测呈阳性的退伍军人,从他们的电子健康记录中提取了年龄、性别、种族和临床特征的数据,并训练了一个DNN模型来预测不良结果。然后,我们使用影响评分和相互作用评分来解释DNN模型,分析了人口变量与不良结果风险的关联。结果显示,平均而言,年龄较大和非裔美国人的种族与较高的风险相关,而女性与较低的风险相关。然而,年龄的个体水平影响评分显示,年龄在年轻患者和合并症较少的老年患者中是一个更有影响的风险因素。性别和种族变量的个体影响得分具有较宽的跨度,涵盖了正负两个值。人口学变量之间的相互作用得分表明,与与之相关的影响得分相比,相互作用的影响是最小的。综上所述,DNN模型能够捕捉到风险因素与不良结果之间的非线性关系,影响评分和相互作用评分可以帮助解释人口变量与结果风险之间复杂的非线性效应。
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来源期刊
Journal of Healthcare Informatics Research
Journal of Healthcare Informatics Research Computer Science-Computer Science Applications
CiteScore
13.60
自引率
1.70%
发文量
12
期刊介绍: Journal of Healthcare Informatics Research serves as a publication venue for the innovative technical contributions highlighting analytics, systems, and human factors research in healthcare informatics.Journal of Healthcare Informatics Research is concerned with the application of computer science principles, information science principles, information technology, and communication technology to address problems in healthcare, and everyday wellness. Journal of Healthcare Informatics Research highlights the most cutting-edge technical contributions in computing-oriented healthcare informatics.  The journal covers three major tracks: (1) analytics—focuses on data analytics, knowledge discovery, predictive modeling; (2) systems—focuses on building healthcare informatics systems (e.g., architecture, framework, design, engineering, and application); (3) human factors—focuses on understanding users or context, interface design, health behavior, and user studies of healthcare informatics applications.   Topics include but are not limited to: ·         healthcare software architecture, framework, design, and engineering;·         electronic health records·         medical data mining·         predictive modeling·         medical information retrieval·         medical natural language processing·         healthcare information systems·         smart health and connected health·         social media analytics·         mobile healthcare·         medical signal processing·         human factors in healthcare·         usability studies in healthcare·         user-interface design for medical devices and healthcare software·         health service delivery·         health games·         security and privacy in healthcare·         medical recommender system·         healthcare workflow management·         disease profiling and personalized treatment·         visualization of medical data·         intelligent medical devices and sensors·         RFID solutions for healthcare·         healthcare decision analytics and support systems·         epidemiological surveillance systems and intervention modeling·         consumer and clinician health information needs, seeking, sharing, and use·         semantic Web, linked data, and ontology·         collaboration technologies for healthcare·         assistive and adaptive ubiquitous computing technologies·         statistics and quality of medical data·         healthcare delivery in developing countries·         health systems modeling and simulation·         computer-aided diagnosis
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