Small-world networks decrease the speed of Muller's ratchet.

Jaime Combadão, Paulo R A Campos, Francisco Dionisio, Isabel Gordo
{"title":"Small-world networks decrease the speed of Muller's ratchet.","authors":"Jaime Combadão,&nbsp;Paulo R A Campos,&nbsp;Francisco Dionisio,&nbsp;Isabel Gordo","doi":"10.1017/S0016672307008658","DOIUrl":null,"url":null,"abstract":"<p><p>Muller's ratchet is an evolutionary process that has been implicated in the extinction of asexual species, the evolution of non-recombining genomes, such as the mitochondria, the degeneration of the Y chromosome, and the evolution of sex and recombination. Here we study the speed of Muller's ratchet in a spatially structured population which is subdivided into many small populations (demes) connected by migration, and distributed on a graph. We studied different types of networks: regular networks (similar to the stepping-stone model), small-world networks and completely random graphs. We show that at the onset of the small-world network - which is characterized by high local connectivity among the demes but low average path length - the speed of the ratchet starts to decrease dramatically. This result is independent of the number of demes considered, but is more pronounced the larger the network and the stronger the deleterious effect of mutations. Furthermore, although the ratchet slows down with increasing migration between demes, the observed decrease in speed is smaller in the stepping-stone model than in small-world networks. As migration rate increases, the structured populations approach, but never reach, the result in the corresponding panmictic population with the same number of individuals. Since small-world networks have been shown to describe well the real contact networks among people, we discuss our results in the light of the evolution of microbes and disease epidemics.</p>","PeriodicalId":12777,"journal":{"name":"Genetical research","volume":"89 1","pages":"7-18"},"PeriodicalIF":0.0000,"publicationDate":"2007-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1017/S0016672307008658","citationCount":"18","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genetical research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1017/S0016672307008658","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 18

Abstract

Muller's ratchet is an evolutionary process that has been implicated in the extinction of asexual species, the evolution of non-recombining genomes, such as the mitochondria, the degeneration of the Y chromosome, and the evolution of sex and recombination. Here we study the speed of Muller's ratchet in a spatially structured population which is subdivided into many small populations (demes) connected by migration, and distributed on a graph. We studied different types of networks: regular networks (similar to the stepping-stone model), small-world networks and completely random graphs. We show that at the onset of the small-world network - which is characterized by high local connectivity among the demes but low average path length - the speed of the ratchet starts to decrease dramatically. This result is independent of the number of demes considered, but is more pronounced the larger the network and the stronger the deleterious effect of mutations. Furthermore, although the ratchet slows down with increasing migration between demes, the observed decrease in speed is smaller in the stepping-stone model than in small-world networks. As migration rate increases, the structured populations approach, but never reach, the result in the corresponding panmictic population with the same number of individuals. Since small-world networks have been shown to describe well the real contact networks among people, we discuss our results in the light of the evolution of microbes and disease epidemics.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
小世界网络降低了穆勒棘轮的速度。
穆勒棘轮是一个进化过程,与无性物种的灭绝、非重组基因组(如线粒体)的进化、Y染色体的退化以及性和重组的进化有关。在这里,我们研究了穆勒棘轮在一个空间结构种群中的速度,该种群被细分为许多通过迁移连接的小种群(demes),并分布在一个图上。我们研究了不同类型的网络:规则网络(类似于踏脚石模型)、小世界网络和完全随机图。我们发现,在小世界网络的初始阶段,棘轮的速度开始急剧下降,这种网络的特征是网络之间的局部连通性较高,但平均路径长度较短。这一结果与所考虑的个体数量无关,但网络越大,突变的有害影响越强,结果就越明显。此外,尽管棘轮会随着网络间迁移的增加而减慢,但在踏脚石模型中观察到的速度下降比在小世界网络中要小。随着迁移率的增加,结构种群接近但永远不会达到具有相同个体数量的相应的泛型种群。由于小世界网络已被证明可以很好地描述人们之间的真实接触网络,我们将根据微生物和疾病流行的进化来讨论我们的结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Wild populations are smaller than we think: a commentary on 'Effective population size/adult population size ratios in wildlife: a review' by Richard Frankham. Impact of selection on effective population size: a commentary on 'Inbreeding in artificial selection programmes' by Alan Robertson. Hybrid dysgenesis: from darkness into light: a commentary on 'Hybrid dysgenesis in Drosophila melanogaster: rules of inheritance of female sterility' by William R. Engels. A model in two acts: a commentary on 'A model detectable alleles in a finite population' by Timoko Ohta and Motoo Kimura. Estimating the recombination parameter: a commentary on 'Estimating the recombination parameter of a finite population model without selection' by Richard R. Hudson.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1