Seven-signal proteomic signature for detection of operable pancreatic ductal adenocarcinoma and their discrimination from autoimmune pancreatitis.

International journal of proteomics Pub Date : 2012-01-01 Epub Date: 2012-05-14 DOI:10.1155/2012/510397
Kiyoshi Yanagisawa, Shuta Tomida, Keitaro Matsuo, Chinatsu Arima, Miyoko Kusumegi, Yukihiro Yokoyama, Shigeru B H Ko, Nobumasa Mizuno, Takeo Kawahara, Yoko Kuroyanagi, Toshiyuki Takeuchi, Hidemi Goto, Kenji Yamao, Masato Nagino, Kazuo Tajima, Takashi Takahashi
{"title":"Seven-signal proteomic signature for detection of operable pancreatic ductal adenocarcinoma and their discrimination from autoimmune pancreatitis.","authors":"Kiyoshi Yanagisawa,&nbsp;Shuta Tomida,&nbsp;Keitaro Matsuo,&nbsp;Chinatsu Arima,&nbsp;Miyoko Kusumegi,&nbsp;Yukihiro Yokoyama,&nbsp;Shigeru B H Ko,&nbsp;Nobumasa Mizuno,&nbsp;Takeo Kawahara,&nbsp;Yoko Kuroyanagi,&nbsp;Toshiyuki Takeuchi,&nbsp;Hidemi Goto,&nbsp;Kenji Yamao,&nbsp;Masato Nagino,&nbsp;Kazuo Tajima,&nbsp;Takashi Takahashi","doi":"10.1155/2012/510397","DOIUrl":null,"url":null,"abstract":"<p><p>There is urgent need for biomarkers that provide early detection of pancreatic ductal adenocarcinoma (PDAC) as well as discrimination of autoimmune pancreatitis, as current clinical approaches are not suitably accurate for precise diagnosis. We used mass spectrometry to analyze protein profiles of more than 300 plasma specimens obtained from PDAC, noncancerous pancreatic diseases including autoimmune pancreatitis patients and healthy subjects. We obtained 1063 proteomic signals from 160 plasma samples in the training cohort. A proteomic signature consisting of 7 mass spectrometry signals was used for construction of a proteomic model for detection of PDAC patients. Using the test cohort, we confirmed that this proteomic model had discrimination power equal to that observed with the training cohort. The overall sensitivity and specificity for detection of cancer patients were 82.6% and 90.9%, respectively. Notably, 62.5% of the stage I and II cases were detected by our proteomic model. We also found that 100% of autoimmune pancreatitis patients were correctly assigned as noncancerous individuals. In the present paper, we developed a proteomic model that was shown able to detect early-stage PDAC patients. In addition, our model appeared capable of discriminating patients with autoimmune pancreatitis from those with PDAC.</p>","PeriodicalId":73474,"journal":{"name":"International journal of proteomics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2012-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1155/2012/510397","citationCount":"5","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of proteomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1155/2012/510397","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2012/5/14 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 5

Abstract

There is urgent need for biomarkers that provide early detection of pancreatic ductal adenocarcinoma (PDAC) as well as discrimination of autoimmune pancreatitis, as current clinical approaches are not suitably accurate for precise diagnosis. We used mass spectrometry to analyze protein profiles of more than 300 plasma specimens obtained from PDAC, noncancerous pancreatic diseases including autoimmune pancreatitis patients and healthy subjects. We obtained 1063 proteomic signals from 160 plasma samples in the training cohort. A proteomic signature consisting of 7 mass spectrometry signals was used for construction of a proteomic model for detection of PDAC patients. Using the test cohort, we confirmed that this proteomic model had discrimination power equal to that observed with the training cohort. The overall sensitivity and specificity for detection of cancer patients were 82.6% and 90.9%, respectively. Notably, 62.5% of the stage I and II cases were detected by our proteomic model. We also found that 100% of autoimmune pancreatitis patients were correctly assigned as noncancerous individuals. In the present paper, we developed a proteomic model that was shown able to detect early-stage PDAC patients. In addition, our model appeared capable of discriminating patients with autoimmune pancreatitis from those with PDAC.

Abstract Image

Abstract Image

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
可手术胰腺导管腺癌的七信号蛋白质组学检测及其与自身免疫性胰腺炎的区别。
由于目前的临床方法不适合精确诊断,迫切需要生物标志物来提供胰腺导管腺癌(PDAC)的早期检测以及自身免疫性胰腺炎的区分。我们使用质谱法分析了300多份来自PDAC、非癌性胰腺疾病(包括自身免疫性胰腺炎患者)和健康受试者的血浆样本的蛋白质谱。我们从训练队列中的160个血浆样本中获得了1063个蛋白质组学信号。利用由7个质谱信号组成的蛋白质组学特征构建PDAC患者检测的蛋白质组学模型。通过测试队列,我们证实该蛋白质组学模型具有与训练队列相同的辨别能力。检测肿瘤患者的总体敏感性和特异性分别为82.6%和90.9%。值得注意的是,62.5%的I期和II期病例被我们的蛋白质组学模型检测到。我们还发现100%的自身免疫性胰腺炎患者被正确地分配为非癌性个体。在本文中,我们开发了一种能够检测早期PDAC患者的蛋白质组学模型。此外,我们的模型似乎能够区分自身免疫性胰腺炎患者和PDAC患者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Miniaturized Digestion and Extraction of Surface Proteins from Candida albicans following Treatment with Histatin 5 for Mass Spectrometry Analysis Comparative Proteomic Analysis of Differential Proteins in Response to Aqueous Extract of Quercus infectoria Gall in Methicillin-Resistant Staphylococcus aureus Optimization of Urea Based Protein Extraction from Formalin-Fixed Paraffin-Embedded Tissue for Shotgun Proteomics Label-Free Proteomic Analysis of Flavohemoglobin Deleted Strain of Saccharomyces cerevisiae S-Nitrosylation Proteome Profile of Peripheral Blood Mononuclear Cells in Human Heart Failure.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1