Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of a cyclophilin A-like protein from Piriformospora indica.

Harshesh Bhatt, Dipesh Kumar Trivedi, Ravi Kant Pal, Atul Kumar Johri, Narendra Tuteja, Neel Sarovar Bhavesh
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Abstract

Cyclophilins are widely distributed both in eukaryotes and prokaryotes and have a primary role as peptidyl-prolyl cis-trans isomerases (PPIases). This study focuses on the cloning, expression, purification and crystallization of a salinity-stress-induced cyclophilin A (CypA) homologue from the symbiotic fungus Piriformospora indica. Crystallization experiments in the presence of 56 mM sodium phosphate monobasic monohydrate, 1.34 M potassium phosphate dibasic pH 8.2 yielded crystals that were suitable for X-ray diffraction analysis. The crystals belonged to the orthorhombic space group C222(1), with unit-cell parameters a = 121.15, b = 144.12, c = 110.63 Å. The crystals diffracted to a resolution limit of 2.0 Å. Analysis of the diffraction data indicated the presence of three molecules of the protein per asymmetric unit (V(M) = 4.48 Å(3) Da(-1), 72.6% solvent content).

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从 Piriformospora indica 中克隆、纯化、结晶和初步 X 射线晶体学分析一种类似于 cyclophilin A 的蛋白质。
嗜环蛋白广泛分布于真核生物和原核生物中,其主要作用是肽基-脯氨酰顺反异构酶(PPI酶)。本研究的重点是克隆、表达、纯化和结晶来自共生真菌 Piriformospora indica 的盐胁迫诱导环嗜蛋白 A(CypA)同源物。在 56 毫摩尔一水磷酸二氢钠和 1.34 毫摩尔二水磷酸二氢钾(pH 值为 8.2)条件下进行的结晶实验得到了适合进行 X 射线衍射分析的晶体。衍射数据分析表明,每个不对称单元含有三个分子的蛋白质(V(M) = 4.48 Å(3) Da(-1),溶剂含量为 72.6%)。
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期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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