Correlation between the Vibrational Frequencies of the Carboxylate Group and the Types of Its Coordination to a Metal Ion:  An ab Initio Molecular Orbital Study

Masayuki Nara, Hajime Torii, Mitsuo Tasumi
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引用次数: 365

Abstract

The structures and vibrational frequencies of the acetate ion interacting with a metal ion (Na+, Mg2+, and Ca2+) in the unidentate, bidentate, bridging, and pseudobridging forms are studied by ab initio molecular orbital calculations. Effects of a water molecule coordinating to either the acetate ion or the metal ion are also examined. The calculations are carried out by using the self-consistent reaction field method at the Hartree?Fock level with the 6-31+G** basis set. For the species interacting with a divalent metal cation, the lengths of the two CO bonds of the acetate ion are nearly equal in the bidentate form but are significantly different in the unidentate form. The frequency of the COO- antisymmetric stretch of the unidentate species is higher than that of the ionic species, which is in turn higher than that of the bidentate species. The reverse is the case for the COO- symmetric stretch. As a result, the frequency separations (Δνa-s) between the COO- antisymmetric and symmetric stretches for the unidentate, bidentate, and ionic species are in the following order:? Δνa-s (unidentate) > Δνa-s (ionic) > Δνa-s (bidentate). It is demonstrated that such a correlation between the vibrational frequencies of the COO- group and the types of its coordination to a divalent metal cation is related to changes in the CO bond lengths and the OCO angle. The results of the present study clarify the physical basis of the empirical structure?frequency correlation, which has been used in the analysis of the infrared spectra of Ca2+-binding proteins.

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羧酸基的振动频率与其与金属离子配位类型的相关性:从头算分子轨道研究
通过从头算分子轨道计算,研究了醋酸盐离子与金属离子(Na+, Mg2+和Ca2+)以异齿、双齿、桥接和伪桥接形式相互作用的结构和振动频率。还研究了水分子与醋酸离子或金属离子配位的影响。计算采用自洽反应场法在Hartree?以6-31+G**为基准设置。对于与二价金属阳离子相互作用的物质,醋酸离子的两个CO键的长度在双齿态下几乎相等,而在不相同态下则有显著差异。非同构种的COO-反对称拉伸频率高于离子种,而离子种的COO-反对称拉伸频率又高于双齿种。COO对称拉伸的情况正好相反。因此,COO-不对称伸展和对称伸展之间的频率间隔(Δνa-s)对于不相同的,双齿的,和离子种是按以下顺序:?Δνa-s(身份不明)>Δνa-s(离子)>Δν的(双齿)。结果表明,COO-基团的振动频率与其与二价金属阳离子的配位类型之间的相关性与CO键长度和OCO角的变化有关。本研究的结果阐明了实证结构的物理基础。频率相关,已用于分析Ca2+结合蛋白的红外光谱。
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