Crystal structure of a macrophage migration inhibitory factor from Giardia lamblia.

Garry W Buchko, Jan Abendroth, Howard Robinson, Yanfeng Zhang, Stephen N Hewitt, Thomas E Edwards, Wesley C Van Voorhis, Peter J Myler
{"title":"Crystal structure of a macrophage migration inhibitory factor from Giardia lamblia.","authors":"Garry W Buchko,&nbsp;Jan Abendroth,&nbsp;Howard Robinson,&nbsp;Yanfeng Zhang,&nbsp;Stephen N Hewitt,&nbsp;Thomas E Edwards,&nbsp;Wesley C Van Voorhis,&nbsp;Peter J Myler","doi":"10.1007/s10969-013-9155-9","DOIUrl":null,"url":null,"abstract":"<p><p>Macrophage migration inhibitory factor (MIF) is a eukaryotic cytokine that affects a broad spectrum of immune responses and its activation/inactivation is associated with numerous diseases. During protozoan infections MIF is not only expressed by the host, but, has also been observed to be expressed by some parasites and released into the host. To better understand the biological role of parasitic MIF proteins, the crystal structure of the MIF protein from Giardia lamblia (Gl-MIF), the etiological agent responsible for giardiasis, has been determined at 2.30 Å resolution. The 114-residue protein adopts an α/β fold consisting of a four-stranded β-sheet with two anti-parallel α-helices packed against a face of the β-sheet. An additional short β-strand aligns anti-parallel to β4 of the β-sheet in the adjacent protein unit to help stabilize a trimer, the biologically relevant unit observed in all solved MIF crystal structures to date, and form a discontinuous β-barrel. The structure of Gl-MIF is compared to the MIF structures from humans (Hs-MIF) and three Plasmodium species (falciparum, berghei, and yoelii). The structure of all five MIF proteins are generally similar with the exception of a channel that runs through the center of each trimer complex. Relative to Hs-MIF, there are differences in solvent accessibility and electrostatic potential distribution in the channel of Gl-MIF and the Plasmodium-MIFs due primarily to two \"gate-keeper\" residues in the parasitic MIFs. For the Plasmodium MIFs the gate-keeper residues are at positions 44 (Y --> R) and 100 (V --> D) and for Gl-MIF it is at position 100 (V --> R). If these gate-keeper residues have a biological function and contribute to the progression of parasitemia they may also form the basis for structure-based drug design targeting parasitic MIF proteins.</p>","PeriodicalId":73957,"journal":{"name":"Journal of structural and functional genomics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2013-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s10969-013-9155-9","citationCount":"12","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of structural and functional genomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s10969-013-9155-9","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2013/5/25 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 12

Abstract

Macrophage migration inhibitory factor (MIF) is a eukaryotic cytokine that affects a broad spectrum of immune responses and its activation/inactivation is associated with numerous diseases. During protozoan infections MIF is not only expressed by the host, but, has also been observed to be expressed by some parasites and released into the host. To better understand the biological role of parasitic MIF proteins, the crystal structure of the MIF protein from Giardia lamblia (Gl-MIF), the etiological agent responsible for giardiasis, has been determined at 2.30 Å resolution. The 114-residue protein adopts an α/β fold consisting of a four-stranded β-sheet with two anti-parallel α-helices packed against a face of the β-sheet. An additional short β-strand aligns anti-parallel to β4 of the β-sheet in the adjacent protein unit to help stabilize a trimer, the biologically relevant unit observed in all solved MIF crystal structures to date, and form a discontinuous β-barrel. The structure of Gl-MIF is compared to the MIF structures from humans (Hs-MIF) and three Plasmodium species (falciparum, berghei, and yoelii). The structure of all five MIF proteins are generally similar with the exception of a channel that runs through the center of each trimer complex. Relative to Hs-MIF, there are differences in solvent accessibility and electrostatic potential distribution in the channel of Gl-MIF and the Plasmodium-MIFs due primarily to two "gate-keeper" residues in the parasitic MIFs. For the Plasmodium MIFs the gate-keeper residues are at positions 44 (Y --> R) and 100 (V --> D) and for Gl-MIF it is at position 100 (V --> R). If these gate-keeper residues have a biological function and contribute to the progression of parasitemia they may also form the basis for structure-based drug design targeting parasitic MIF proteins.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
蓝氏贾第鞭毛虫巨噬细胞迁移抑制因子晶体结构。
巨噬细胞迁移抑制因子(MIF)是一种影响广泛免疫反应的真核细胞因子,其激活/失活与许多疾病有关。在原生动物感染过程中,MIF不仅由宿主表达,也被观察到由一些寄生虫表达并释放到宿主体内。为了更好地了解寄生MIF蛋白的生物学作用,已经在2.30 Å分辨率下确定了来自贾第鞭毛虫(贾第鞭毛虫是贾第鞭毛虫的致病因子)的MIF蛋白的晶体结构。114-残基蛋白采用α/β折叠,由四链β片和两个反平行α-螺旋排列在β片的表面组成。额外的短β-链与相邻蛋白质单元中β-片的β4反平行排列,以帮助稳定三聚体(迄今为止在所有已解决的MIF晶体结构中观察到的生物学相关单元),并形成不连续的β-桶。将Gl-MIF的结构与人类(Hs-MIF)和三种疟原虫(恶性疟原虫、伯格氏疟原虫和约氏疟原虫)的MIF结构进行了比较。除了在每个三聚体复合体的中心有一个通道外,所有五种MIF蛋白的结构一般都很相似。与Hs-MIF相比,Gl-MIF和疟原虫- mif通道内的溶剂可及性和静电电位分布存在差异,这主要是由于寄生mif中存在两个“守门者”残基。对于疟原虫MIF来说,看门基残基位于44 (Y -> R)和100 (V -> D)位置,对于gll -MIF来说,看门基残基位于100 (V -> R)位置。如果这些看门基残基具有生物学功能并有助于寄生虫病的进展,它们也可能构成基于结构的药物设计的基础,靶向寄生虫MIF蛋白。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Structural Genomics: General Applications Classification of ligand molecules in PDB with graph match-based structural superposition HOMCOS: an updated server to search and model complex 3D structures. NLDB: a database for 3D protein-ligand interactions in enzymatic reactions. Toward the next step in G protein-coupled receptor research: a knowledge-driven analysis for the next potential targets in drug discovery
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1