Investigation of dmyc Promoter and Regulatory Regions.

Gene regulation and systems biology Pub Date : 2013-05-15 Print Date: 2013-01-01 DOI:10.4137/GRSB.S10751
Jasmine Kharazmi, Cameron Moshfegh
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引用次数: 1

Abstract

Products of the myc gene family integrate extracellular signals by modulating a wide range of their targets involved in cellular biogenesis and metabolism; the purpose of this integration is to regulate cell death, proliferation, and differentiation. However, understanding the regulation of myc at the transcription level remains a challenge. We performed rapid amplification of dmyc cDNA ends (5' RACE) and mapped the transcription start site at P1 promoter, 18 base pairs upstream of the start of the known EST GM01143 and within the 5' UTR. Our data show that the first TATA box, previously computationally predicted, is utilized to generate dmyc full length mRNA. The largest transcript contains all three exons, generated after the removal of the introns by constitutively regulated splicing events. Further investigation of Downstream Promoter Element (DPE) was achieved by studying lacZ reporter activity; investigation revealed that this element and its upstream cluster of binding sites are required for the dmyc intron 2 activity. These findings may provide valuable tools for further analysis of dmyc cis-elements.

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dmyc启动子和调控区域的研究。
myc基因家族的产物通过调节参与细胞生物发生和代谢的广泛靶点来整合细胞外信号;这种整合的目的是调节细胞死亡、增殖和分化。然而,在转录水平上理解myc的调控仍然是一个挑战。我们对dmyc cDNA末端(5' RACE)进行了快速扩增,并在P1启动子上定位了转录起始位点,位于已知EST GM01143起始位点上游18个碱基对,位于5' UTR内。我们的数据表明,先前计算预测的第一个TATA盒被用来生成dmyc全长mRNA。最大的转录本包含所有三个外显子,是在内含子被本构调节剪接事件去除后产生的。通过对lacZ报告基因活性的研究,进一步研究了下游启动子元件(DPE);研究表明,dmyc内含子2的活性需要该元件及其上游结合位点簇。这些发现可能为进一步分析dmyc顺式元素提供有价值的工具。
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