DATASW, a tool for HPLC-SAXS data analysis.

Alexander V Shkumatov, Sergei V Strelkov
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引用次数: 34

Abstract

Small-angle X-ray scattering (SAXS) in solution is a common low-resolution method which can efficiently complement the high-resolution information obtained by crystallography or NMR. Sample monodispersity is key to reliable SAXS data interpretation and model building. Beamline setups with inline high-performance liquid chromatography (HPLC) are particularly useful for accurate profiling of heterogeneous samples. The program DATASW performs averaging of individual data frames from HPLC-SAXS experiments using a sliding window of a user-specified size, calculates overall parameters [I(0), Rg, Dmax and molecular weight] and predicts the folding state (folded/unfolded) of the sample. Applications of DATASW are illustrated for several proteins with various oligomerization behaviours recorded on different beamlines. DATASW binaries for major operating systems can be downloaded from http://datasw.sourceforge.net/.

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DATASW,用于HPLC-SAXS数据分析的工具。
溶液中的小角x射线散射(SAXS)是一种常见的低分辨率方法,可以有效地补充晶体学或核磁共振获得的高分辨率信息。样本单分散性是可靠的SAXS数据解释和模型建立的关键。具有高效液相色谱(HPLC)的光束线设置对于异质样品的准确分析特别有用。DATASW程序使用用户指定大小的滑动窗口对HPLC-SAXS实验中的单个数据帧进行平均,计算总体参数[I(0), Rg, Dmax和分子量],并预测样品的折叠状态(折叠/展开)。DATASW的应用说明了几种蛋白质的不同的寡聚化行为记录在不同的光束线上。主要操作系统的DATASW二进制文件可以从http://datasw.sourceforge.net/下载。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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