Segmentation of orbital and periorbital lesions detected in orbital magnetic resonance imaging by deep learning method.

IF 0.9 Q4 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Polish Journal of Radiology Pub Date : 2022-09-19 eCollection Date: 2022-01-01 DOI:10.5114/pjr.2022.119808
Nevin Aydin, Suzan Saylisoy, Ozer Celik, Ahmet Faruk Aslan, Alper Odabas
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Abstract

Purpose: Magnetic resonance imaging (MRI) has a special place in the evaluation of orbital and periorbital lesions. Segmentation is one of the deep learning methods. In this study, we aimed to perform segmentation in orbital and periorbital lesions.

Material and methods: Contrast-enhanced orbital MRIs performed between 2010 and 2019 were retrospectively screened, and 302 cross-sections of contrast-enhanced, fat-suppressed, T1-weighted, axial MRI images of 95 patients obtained using 3 T and 1.5 T devices were included in the study. The dataset was divided into 3: training, test, and validation. The number of training and validation data was increased 4 times by applying data augmentation (horizontal, vertical, and both). Pytorch UNet was used for training, with 100 epochs. The intersection over union (IOU) statistic (the Jaccard index) was selected as 50%, and the results were calculated.

Results: The 77th epoch model provided the best results: true positives, 23; false positives, 4; and false negatives, 8. The pre-cision, sensitivity, and F1 score were determined as 0.85, 0.74, and 0.79, respectively.

Conclusions: Our study proved to be successful in segmentation by deep learning method. It is one of the pioneering studies on this subject and will shed light on further segmentation studies to be performed in orbital MR images.

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应用深度学习方法分割眼眶磁共振成像中的眼眶和眶周病变。
目的:磁共振成像(MRI)在眼眶及眶周病变的评价中具有特殊的地位。分割是深度学习的一种方法。在这项研究中,我们的目标是在眼眶和眶周病变中进行分割。材料和方法:回顾性筛选2010年至2019年期间进行的对比增强眼眶MRI,并将95例患者使用3t和1.5 T设备获得的对比增强、脂肪抑制、t1加权、轴向MRI图像的302张横切面纳入研究。数据集分为3个部分:训练、测试和验证。通过应用数据增强(水平、垂直和两者),训练和验证数据的数量增加了4倍。Pytorch UNet用于训练,有100个epoch。选取交联(IOU)统计量(Jaccard指数)为50%,计算结果。结果:第77 epoch模型结果最佳:真阳性23例;误报,4;假阴性,8。精密度、灵敏度和F1评分分别为0.85、0.74和0.79。结论:采用深度学习方法进行图像分割是成功的。这是该主题的开创性研究之一,将为轨道MR图像的进一步分割研究提供启示。
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来源期刊
Polish Journal of Radiology
Polish Journal of Radiology RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING-
CiteScore
2.10
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0.00%
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0
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