[Bacterioplankton Community Structure in the Lancang River Basin and the Analysis of Its Driving Environmental Factors].

Q2 Environmental Science 环境科学 Pub Date : 2018-08-08 DOI:10.13227/j.hjkx.201711014
Bao Cheng, Xue Wang, Ya-Qian Xu, Zheng-Jian Yang, De-Fu Liu, Jun Ma
{"title":"[Bacterioplankton Community Structure in the Lancang River Basin and the Analysis of Its Driving Environmental Factors].","authors":"Bao Cheng,&nbsp;Xue Wang,&nbsp;Ya-Qian Xu,&nbsp;Zheng-Jian Yang,&nbsp;De-Fu Liu,&nbsp;Jun Ma","doi":"10.13227/j.hjkx.201711014","DOIUrl":null,"url":null,"abstract":"<p><p>In order to explore the bacterioplankton diversity community structure in the Lancang River basin, as well as to study the relationship between the bacterial diversity and environmental factors, MiSeq high-throughput sequencing was used to analyze and compare the bacterial diversity and community composition of samples in February 2017. Furthermore, Pearson correlation analysis and redundancy analysis (RDA) were used to identify the key environmental factors for the change of bacterial community structure in the natural river and reservoirs of the Lancang river. The results show that the ACE index and Shannon index of the natural river are higher than those of the reservoir, and the main environmental factors causing the diversity of planktonic bacteria in natural river and reservoir segments are water temperature (WT), dissolved oxygen (DO), turbidity (Tur), permanganate index, pH, and total nitrogen (TN). Overall, 26772 optimized reads were obtained from samples based on the high-throughput sequencing of the V3 and V4 region of the 16S rRNA gene. The bacterial species detected in these samples cover 45 phyla and 965 genera. Taxonomic assignment analysis indicated that Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria are the abundant phyla. Among them, the Proteobacteria content is relatively rich, accounting for 36%-94% of the bacterial community. The predominant groups are <i>α</i>-Proteobacteria, <i>β</i>-Proteobacteria, and <i>γ</i>-Proteobacteria, at the genus level, with Proteobacteria ratios of 0.39%-21.56%, 0.39%-55.80% and 31.09%-99.18%, respectively. The environmental factors affecting the community structure of planktonic bacteria are different in natural river and reservoir. DO and Tur are the key environmental factors affecting the community structure of planktonic bacteria in the natural river, while the community structure of planktonic bacteria in reservoirs is mainly affected by WT, permanganate index, and TN.</p>","PeriodicalId":35937,"journal":{"name":"环境科学","volume":"39 8","pages":"3649-3659"},"PeriodicalIF":0.0000,"publicationDate":"2018-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.13227/j.hjkx.201711014","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"环境科学","FirstCategoryId":"1087","ListUrlMain":"https://doi.org/10.13227/j.hjkx.201711014","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Environmental Science","Score":null,"Total":0}
引用次数: 1

Abstract

In order to explore the bacterioplankton diversity community structure in the Lancang River basin, as well as to study the relationship between the bacterial diversity and environmental factors, MiSeq high-throughput sequencing was used to analyze and compare the bacterial diversity and community composition of samples in February 2017. Furthermore, Pearson correlation analysis and redundancy analysis (RDA) were used to identify the key environmental factors for the change of bacterial community structure in the natural river and reservoirs of the Lancang river. The results show that the ACE index and Shannon index of the natural river are higher than those of the reservoir, and the main environmental factors causing the diversity of planktonic bacteria in natural river and reservoir segments are water temperature (WT), dissolved oxygen (DO), turbidity (Tur), permanganate index, pH, and total nitrogen (TN). Overall, 26772 optimized reads were obtained from samples based on the high-throughput sequencing of the V3 and V4 region of the 16S rRNA gene. The bacterial species detected in these samples cover 45 phyla and 965 genera. Taxonomic assignment analysis indicated that Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria are the abundant phyla. Among them, the Proteobacteria content is relatively rich, accounting for 36%-94% of the bacterial community. The predominant groups are α-Proteobacteria, β-Proteobacteria, and γ-Proteobacteria, at the genus level, with Proteobacteria ratios of 0.39%-21.56%, 0.39%-55.80% and 31.09%-99.18%, respectively. The environmental factors affecting the community structure of planktonic bacteria are different in natural river and reservoir. DO and Tur are the key environmental factors affecting the community structure of planktonic bacteria in the natural river, while the community structure of planktonic bacteria in reservoirs is mainly affected by WT, permanganate index, and TN.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
澜沧江流域浮游细菌群落结构及其驱动环境因子分析
为探索澜沧江流域浮游细菌多样性群落结构,研究细菌多样性与环境因子的关系,于2017年2月利用MiSeq高通量测序技术对样品的细菌多样性和群落组成进行了分析比较。利用Pearson相关分析和冗余分析(RDA)对澜沧江天然河流和水库细菌群落结构变化的关键环境因子进行了分析。结果表明:天然河流的ACE指数和Shannon指数均高于水库,导致天然河流和水库段浮游细菌多样性的主要环境因子是水温(WT)、溶解氧(DO)、浊度(Tur)、高锰酸盐指数、pH和总氮(TN)。通过对16S rRNA基因V3和V4区的高通量测序,共获得26772个优化reads。在这些样本中检测到的细菌种类涵盖45门965属。分类分析表明,变形菌门、拟杆菌门、厚壁菌门和放线菌门是丰富的门。其中变形菌门(Proteobacteria)含量相对丰富,占细菌群落的36%-94%。在属水平上优势类群为α-变形菌门、β-变形菌门和γ-变形菌门,变形菌门比例分别为0.39% ~ 21.56%、0.39% ~ 55.80%和31.09% ~ 99.18%。影响天然河流和水库浮游细菌群落结构的环境因素不同。DO和turr是影响天然河流浮游细菌群落结构的关键环境因子,而水库浮游细菌群落结构主要受WT、高锰酸盐指数和TN的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
环境科学
环境科学 Environmental Science-Environmental Science (all)
CiteScore
4.40
自引率
0.00%
发文量
15329
期刊介绍:
期刊最新文献
[Immobilization of Heavy Metals in Municipal Sludge by Co-pyrolysis of Shaddock Peel and Sludge]. [Impact of Differences in Vegetation Cover on Soil Organic Carbon Composition and Stability in Caohai]. [Analysis of Carbon Emission Characteristics and Influencing Factors in Urban Wastewater Collection Systems under the Background of Quality Improvement and Efficiency Enhancement]. [Analysis of Soil Property Factors Restricting the Remediation Effect of Passivators on Arsenic and Cadmium Pollution in Purple Soil]. [Analysis of Spatiotemporal Changes and Driving Factors of Ecological Environment Quality in the Yellow River Basin].
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1