What Is Required for Neuronal Calcium Waves? A Numerical Parameter Study.

IF 2.3 4区 医学 Q1 Neuroscience Journal of Mathematical Neuroscience Pub Date : 2018-07-13 DOI:10.1186/s13408-018-0064-x
Markus Breit, Gillian Queisser
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引用次数: 11

Abstract

Neuronal calcium signals propagating by simple diffusion and reaction with mobile and stationary buffers are limited to cellular microdomains. The distance intracellular calcium signals can travel may be significantly increased by means of calcium-induced calcium release from internal calcium stores, notably the endoplasmic reticulum. The organelle, which can be thought of as a cell-within-a-cell, is able to sequester large amounts of cytosolic calcium ions via SERCA pumps and selectively release them into the cytosol through ryanodine receptor channels leading to the formation of calcium waves. In this study, we set out to investigate the basic properties of such dendritic calcium waves and how they depend on the three parameters dendrite radius, ER radius and ryanodine receptor density in the endoplasmic membrane. We demonstrate that there are stable and abortive regimes for calcium waves, depending on the above morphological and physiological parameters. In stable regimes, calcium waves can travel across long dendritic distances, similar to electrical action potentials. We further observe that abortive regimes exist, which could be relevant for spike-timing dependent plasticity, as travel distances and wave velocities vary with changing intracellular architecture. For some of these regimes, analytic functions could be derived that fit the simulation data. In parameter spaces, that are non-trivially influenced by the three-dimensional calcium concentration profile, we were not able to derive such a functional description, demonstrating the mathematical requirement to model and simulate biochemical signaling in three-dimensional space.

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神经元钙波需要什么?数值参数研究。
神经元钙信号通过简单的扩散和与移动和固定缓冲液的反应传播,仅限于细胞微域。细胞内钙信号可以通过钙诱导钙从内部钙储存,特别是内质网释放的方式传播的距离显著增加。细胞器可以被认为是细胞内的细胞,它能够通过SERCA泵隔离大量的细胞质钙离子,并通过ryanodine受体通道选择性地将它们释放到细胞质中,从而形成钙波。在这项研究中,我们开始研究这种树突钙波的基本性质,以及它们如何依赖于三个参数树突半径,内质膜ER半径和ryanodine受体密度。我们证明,钙波有稳定和流产的制度,取决于上述形态和生理参数。在稳定的状态下,钙波可以穿过很长的树突距离,类似于电动作电位。我们进一步观察到,由于传播距离和波速随细胞内结构的变化而变化,存在流产机制,这可能与峰值时间依赖的可塑性有关。对于其中一些情况,可以推导出适合模拟数据的解析函数。在不受三维钙浓度分布影响的参数空间中,我们无法推导出这样的功能描述,这证明了在三维空间中建模和模拟生化信号的数学要求。
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来源期刊
Journal of Mathematical Neuroscience
Journal of Mathematical Neuroscience Neuroscience-Neuroscience (miscellaneous)
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审稿时长
13 weeks
期刊介绍: The Journal of Mathematical Neuroscience (JMN) publishes research articles on the mathematical modeling and analysis of all areas of neuroscience, i.e., the study of the nervous system and its dysfunctions. The focus is on using mathematics as the primary tool for elucidating the fundamental mechanisms responsible for experimentally observed behaviours in neuroscience at all relevant scales, from the molecular world to that of cognition. The aim is to publish work that uses advanced mathematical techniques to illuminate these questions. It publishes full length original papers, rapid communications and review articles. Papers that combine theoretical results supported by convincing numerical experiments are especially encouraged. Papers that introduce and help develop those new pieces of mathematical theory which are likely to be relevant to future studies of the nervous system in general and the human brain in particular are also welcome.
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