Genetic differentiation and phylogenetic relationship of 11 Asian Sisorinae genera (Siluriformes: Sisoridae) with new record of Pseudolaguvia foveolata.

Kavita Kumari, Manas H M, Archana Sinha, Satish Kumar Koushlesh, Soma Das Sarkar, Simanku Borah, Raju BaItha, Bijay Kumar Behera, Basanta Kumar Das
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引用次数: 3

Abstract

Studies on Sisorinae systematics have been largely restricted to morphological data with few studies on examination of phylogenetic relations. However, no study has been done to evaluate genetic distance of the genera under Sisorinae sub-family and detailed phylogenetic relations within it. We used nuclear recombination activating 2 (rag2) gene and mitochondrial cytochrome c oxidase I (COI) gene from 64 species to examine genetic differentiation and phylogenetic relationships within 11 Asian Sisorinae genera. The range of interspecies K2P distance for rag2 was 0-0.061 and COI was 0-0.204. Phylogenetic analysis based on maximum likelihood (ML) and Bayesian (BI) approaches for each locus individually and for the concatenated rag2 and COI sequences revealed three major subclades viz. Bagariini, Sisorini and Erethistini under subfamily Sisorinae. The analysis based on COI gene showed ((Sisorini, Bagariini), Erethistini) relationship. Rag2 and combined rag2 and COI showed ((Sisorini, Erethistini), Bagariini) relationship. Combined rag2 and COI analyses resulted into better resolved trees with a good bootstrap support. In this study, new record of Pseudolaguvia foveolata (Erethistini) has been documented based on 13 specimens collected from Torsa River, Jaldapara, Alipurduar district, West Bengal, India (26°43'44.66″ N and 89°19'32.34″ E), extending its distribution range in Brahmaputra drainage, India. The genetic distance between the P. foveolata new record and the reported P. foveolata (holotype: UMMZ 244867) was 0.00 at both rag2 and COI locus and it was further grouped with P. foveolata Type specimen (holotype: UMMZ 244867) with 100% bootstrap support. This report gives additional information on occurrence of the species P. foveolata, along with discussion on morphometric, meristic and molecular (COI and rag2 gene) data.

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亚洲11个剑齿苋属(剑齿苋目:剑齿苋科)的遗传分化和系统发育关系及伪剑齿苋新记录。
对茜草科的系统学研究主要局限于形态学资料,对系统发育关系的研究较少。然而,目前还没有研究对茜草亚科属的遗传距离进行评估,并对其系统发育关系进行了详细的研究。利用核重组激活2 (rag2)基因和线粒体细胞色素c氧化酶I (COI)基因对11个亚洲茜草科属的遗传分化和系统发育关系进行了研究。rag2的种间K2P距离为0 ~ 0.061,COI为0 ~ 0.204。基于最大似然(ML)和贝叶斯(BI)方法对每个基因座进行系统发育分析,并对rag2和COI序列进行串联分析,揭示了Sisorinae亚科下的Bagariini、Sisorini和Erethistini三个主要亚支。基于COI基因的分析显示((Sisorini, Bagariini), Erethistini)亲缘关系。Rag2和组合Rag2与COI呈((Sisorini, Erethistini), Bagariini)关系。结合rag2和COI分析可以得到具有良好引导支持的更好的树。本文在印度西孟加拉邦Alipurduar地区Jaldapara的Torsa河(26°43′44.66″N和89°19′32.34″E)采集的13个标本中,记录了伪olaguvia foveolata (Erethistini)的新记录,扩大了其在印度布拉马普特拉河流域的分布范围。在rag2位点和COI位点上,新记录与已报道的foveolata (holotype: UMMZ 244867)的遗传距离均为0.00,并进一步与foveolata (holotype: UMMZ 244867)进行分组,100% bootstrap支持。本报告提供了关于P. foveolata物种发生的更多信息,并讨论了形态计量学、分分体和分子(COI和rag2基因)数据。
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