Reprogramming cooperative monotone dynamical systems.

Rushina Shah, Domitilla Del Vecchio
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引用次数: 1

Abstract

Multistable dynamical systems are ubiquitous in nature, especially in the context of regulatory networks controlling cell fate decisions, wherein stable steady states correspond to different cell phenotypes. In the past decade, it has become experimentally possible to "reprogram" the fate of a cell by suitable externally imposed input stimulations. In several of these reprogramming instances, the underlying regulatory network has a known structure and often it falls in the class of cooperative monotone dynamical systems. In this paper, we therefore leverage this structure to provide concrete guidance on the choice of inputs that reprogram a cooperative dynamical system to a desired target steady state. Our results are parameter-independent and therefore can serve as a practical guidance to cell-fate reprogramming experiments.

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重新编程合作单调动力系统。
多稳态动力系统在自然界中无处不在,特别是在控制细胞命运决定的调节网络中,其中稳定的稳态对应于不同的细胞表型。在过去的十年里,通过适当的外部输入刺激来“重新编程”细胞的命运在实验上已经成为可能。在这些重编程实例中,潜在的调节网络具有已知的结构,并且通常属于合作单调动态系统。因此,在本文中,我们利用这种结构为输入的选择提供具体的指导,将合作动力系统重新编程到期望的目标稳态。我们的结果是参数无关的,因此可以作为细胞命运重编程实验的实际指导。
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