HIV/HAART-associated oxidative stress is detectable by metabonomics

IF 3.743 Q2 Biochemistry, Genetics and Molecular Biology Molecular BioSystems Pub Date : 2017-09-18 DOI:10.1039/C7MB00336F
Aurelia A. Williams, Lungile J. Sitole and Debra Meyer
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引用次数: 75

Abstract

Chronic human immunodeficiency virus (HIV) infection, separately and in combination with highly active antiretroviral therapy (HAART) is closely associated with oxidative stress (OS). Most studies demonstrating redox imbalances in HIV-infected individuals have done so using conventional biochemical methodologies. The limited simultaneous detection of multiple OS markers within one sample is a major drawback of these methodologies and can be addressed through the use of metabonomics. HIV-metabonomic studies utilizing biofluids from HAART cohorts as the investigative source, are on the increase. Data from many of these studies identified metabolic markers indicative of HIV-induced OS, usually as an outcome of an untargeted metabonomics study. Untargeted studies cast a wide net for any and all detectable metabolites in complex mixtures. Given the prevalence of OS during HIV infection and antiviral treatment, it is perhaps not surprising that indicators of this malady would become evident during metabolite identification. At times, targeted studies for specific (non-OS) metabolites would also yield OS markers as an outcome. This review examines the findings of these studies by first providing the necessary background information on OS and the main ways in which free radicals/reactive oxygen species (ROS) produced during OS, cause biomolecular damage. This is followed by information on the biomarkers which come about as a result of free radical damage and the techniques used for assaying these stress indicators. The established links between elevated ROS and lowered antioxidants during HIV infection and the subsequent use of HAART is then presented followed by a review of the OS markers detected in HIV metabonomic studies to date. We identify gaps in HIV/HAART-associated OS research and finally suggest how these research gaps can be addressed through metabonomic analysis, specifically targeting the multiple markers of HIV-induced OS.

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HIV/ haart相关的氧化应激可通过代谢组学检测
慢性人类免疫缺陷病毒(HIV)感染,单独或联合高活性抗逆转录病毒治疗(HAART)与氧化应激(OS)密切相关。大多数证明艾滋病毒感染者氧化还原失衡的研究都是使用传统的生化方法进行的。在一个样本中同时检测多个OS标记是这些方法的一个主要缺点,可以通过使用代谢组学来解决。利用HAART队列的生物体液作为调查来源的艾滋病毒代谢组学研究正在增加。这些研究中的许多数据确定了指示hiv诱导的OS的代谢标记物,通常作为非靶向代谢组学研究的结果。无目标的研究为复杂混合物中任何和所有可检测的代谢物撒下了广泛的网。鉴于艾滋病毒感染和抗病毒治疗期间OS的流行,这种疾病的指标在代谢物鉴定过程中变得明显也许并不奇怪。有时,针对特定(非OS)代谢物的靶向研究也会产生OS标记物作为结果。本文综述了这些研究结果,首先提供了OS的必要背景信息以及OS产生的自由基/活性氧(ROS)引起生物分子损伤的主要途径。接下来是关于自由基损伤产生的生物标志物的信息,以及用于分析这些压力指标的技术。在HIV感染期间ROS升高和抗氧化剂降低以及随后使用HAART之间建立了联系,然后对迄今为止在HIV代谢组学研究中检测到的OS标记进行了回顾。我们确定了HIV/ haart相关OS研究的空白,最后提出了如何通过代谢组学分析来解决这些研究空白,特别是针对HIV诱导的OS的多个标记。
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来源期刊
Molecular BioSystems
Molecular BioSystems 生物-生化与分子生物学
CiteScore
2.94
自引率
0.00%
发文量
0
审稿时长
2.6 months
期刊介绍: Molecular Omics publishes molecular level experimental and bioinformatics research in the -omics sciences, including genomics, proteomics, transcriptomics and metabolomics. We will also welcome multidisciplinary papers presenting studies combining different types of omics, or the interface of omics and other fields such as systems biology or chemical biology.
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