P311 regulates distal lung development via its interaction with several binding proteins

IF 2.6 Q2 Medicine Mechanisms of Development Pub Date : 2020-09-01 DOI:10.1016/j.mod.2020.103633
Yu Liu , Xiaohai Zhou , Naiyue Hu , Chunyan Wang , Liqing Zhao
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引用次数: 2

Abstract

Little is known about the molecular mechanisms underlying alveolar development. P311, a putative neuronal protein originally identified for its high expression during neuronal development, has once been reported to play a potential role in distal lung generation. However, the function of this protein has been poorly understood so far. Hence, we carried out a yeast two-hybrid screen, combining with other protein-protein interaction experiments, to isolate several binding partners of P311 during lung development, which may help us explore its function. We report 7 proteins here, including Gal-1, Loxl-1 and SPARC, etc, that can interact with it. Most of them have similar spatio-temporal expression patterns to P311. In addition, it was also found that P311 could stimulate their expression indirectly in L929 mouse fibroblast. Besides, computational methods were applied to construct a P311 centered protein-protein interaction network during alveolarization, using the 7 binding partners and their protein interaction information provided by public data resources. By analyzing the structure and function of this network, the effects of P311 on lung development were further clarified and all of the bioinformatic predictions from the network could be validated by real experiments. We have found here that P311 can control lung redox events, extracellular matrix and cell cycle progression, which are all crucial to pulmonary morphogenesis. This gives us a novel thought to explore the mechanisms controlling alveolarization.

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P311通过与几种结合蛋白的相互作用调节远端肺发育
对肺泡发育的分子机制知之甚少。P311是一种假设的神经元蛋白,最初被发现在神经元发育过程中高表达,曾有报道称在远端肺生成中发挥潜在作用。然而,到目前为止,人们对这种蛋白质的功能知之甚少。因此,我们通过酵母双杂交筛选,结合其他蛋白相互作用实验,分离出肺发育过程中P311的几个结合伙伴,这可能有助于我们探索其功能。我们在这里报道了7种蛋白,包括Gal-1、Loxl-1和SPARC等,可以与它相互作用。它们大多具有与P311相似的时空表达模式。此外,还发现P311可以间接刺激它们在L929小鼠成纤维细胞中的表达。此外,利用公共数据资源提供的7个结合伙伴及其蛋白相互作用信息,应用计算方法构建肺泡化过程中以P311为中心的蛋白相互作用网络。通过分析该网络的结构和功能,进一步明确了P311对肺发育的影响,并通过实际实验验证了该网络的所有生物信息学预测。我们在这里发现P311可以控制肺氧化还原事件、细胞外基质和细胞周期进程,这些都是肺形态发生的关键。这为我们探索控制肺泡化的机制提供了一个新的思路。
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来源期刊
Mechanisms of Development
Mechanisms of Development 生物-发育生物学
CiteScore
3.60
自引率
0.00%
发文量
0
审稿时长
12.4 weeks
期刊介绍: Mechanisms of Development is an international journal covering the areas of cell biology and developmental biology. In addition to publishing work at the interphase of these two disciplines, we also publish work that is purely cell biology as well as classical developmental biology. Mechanisms of Development will consider papers in any area of cell biology or developmental biology, in any model system like animals and plants, using a variety of approaches, such as cellular, biomechanical, molecular, quantitative, computational and theoretical biology. Areas of particular interest include: Cell and tissue morphogenesis Cell adhesion and migration Cell shape and polarity Biomechanics Theoretical modelling of cell and developmental biology Quantitative biology Stem cell biology Cell differentiation Cell proliferation and cell death Evo-Devo Membrane traffic Metabolic regulation Organ and organoid development Regeneration Mechanisms of Development does not publish descriptive studies of gene expression patterns and molecular screens; for submission of such studies see Gene Expression Patterns.
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