Deep learning algorithms to isolate and quantify the structures of the anterior segment in optical coherence tomography images.

Tan Hung Pham, Sripad Krishna Devalla, Aloysius Ang, Zhi-Da Soh, Alexandre H Thiery, Craig Boote, Ching-Yu Cheng, Michael J A Girard, Victor Koh
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引用次数: 21

Abstract

Background/aims: Accurate isolation and quantification of intraocular dimensions in the anterior segment (AS) of the eye using optical coherence tomography (OCT) images is important in the diagnosis and treatment of many eye diseases, especially angle-closure glaucoma.

Method: In this study, we developed a deep convolutional neural network (DCNN) for the localisation of the scleral spur; moreover, we introduced an information-rich segmentation approach for this localisation problem. An ensemble of DCNNs for the segmentation of AS structures (iris, corneosclera shell adn anterior chamber) was developed. Based on the results of two previous processes, an algorithm to automatically quantify clinically important measurements were created. 200 images from 58 patients (100 eyes) were used for testing.

Results: With limited training data, the DCNN was able to detect the scleral spur on unseen anterior segment optical coherence tomography (ASOCT) images as accurately as an experienced ophthalmologist on the given test dataset and simultaneously isolated the AS structures with a Dice coefficient of 95.7%. We then automatically extracted eight clinically relevant ASOCT measurements and proposed an automated quality check process that asserts the reliability of these measurements. When combined with an OCT machine capable of imaging multiple radial sections, the algorithms can provide a more complete objective assessment. The total segmentation and measurement time for a single scan is less than 2 s.

Conclusion: This is an essential step towards providing a robust automated framework for reliable quantification of ASOCT scans, for applications in the diagnosis and management of angle-closure glaucoma.

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深度学习算法分离和量化光学相干断层扫描图像前段的结构。
背景/目的:利用光学相干断层扫描(OCT)图像准确地分离和定量眼前段(AS)的眼内尺寸在许多眼病,特别是闭角型青光眼的诊断和治疗中具有重要意义。方法:在本研究中,我们开发了一种用于巩膜骨刺定位的深度卷积神经网络(DCNN);此外,我们引入了一种信息丰富的分割方法来解决这个定位问题。开发了一个用于AS结构(虹膜、角膜巩膜壳和前房)分割的DCNNs集合。基于前两个过程的结果,创建了一个自动量化临床重要测量的算法。来自58名患者(100只眼睛)的200张图像被用于测试。结果:在有限的训练数据下,DCNN能够在未见的前段光学相干断层扫描(ASOCT)图像上检测出与经验丰富的眼科医生一样准确的巩膜骨刺,同时以95.7%的Dice系数分离出as结构。然后,我们自动提取了8个临床相关的ASOCT测量值,并提出了一个自动化的质量检查过程,以断言这些测量值的可靠性。当与能够成像多个径向切片的OCT机器结合使用时,该算法可以提供更完整客观的评估。单次扫描的总分割和测量时间小于2秒。结论:这是为闭角型青光眼的诊断和治疗提供一个可靠的ASOCT扫描定量自动化框架的重要一步。
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