CRISPR-ERA: A Webserver for Guide RNA Design of Gene Editing and Regulation.

Q4 Biochemistry, Genetics and Molecular Biology Methods in molecular biology Pub Date : 2021-01-01 DOI:10.1007/978-1-0716-0822-7_5
Honglei Liu, Xiaowo Wang
{"title":"CRISPR-ERA: A Webserver for Guide RNA Design of Gene Editing and Regulation.","authors":"Honglei Liu, Xiaowo Wang","doi":"10.1007/978-1-0716-0822-7_5","DOIUrl":null,"url":null,"abstract":"<p><p>The CRISPR/Cas9 system has been developed as a powerful technology for both targeted genome editing and gene regulation. However, the design of efficient single-guide RNAs (sgRNAs) remains challenging with the consideration of many criteria. In this section, we introduce how to design sgRNA sequences and build genome-wide sgRNA library using CRISPR-ERA, which is one of the state-of-the-art designer webserver tools for sgRNA design based on a set of sgRNA design rules summarized from published reports.</p>","PeriodicalId":18490,"journal":{"name":"Methods in molecular biology","volume":"2189 ","pages":"65-69"},"PeriodicalIF":0.0000,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Methods in molecular biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/978-1-0716-0822-7_5","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 1

Abstract

The CRISPR/Cas9 system has been developed as a powerful technology for both targeted genome editing and gene regulation. However, the design of efficient single-guide RNAs (sgRNAs) remains challenging with the consideration of many criteria. In this section, we introduce how to design sgRNA sequences and build genome-wide sgRNA library using CRISPR-ERA, which is one of the state-of-the-art designer webserver tools for sgRNA design based on a set of sgRNA design rules summarized from published reports.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
CRISPR-ERA:用于基因编辑和调控的引导 RNA 设计的网络服务器。
CRISPR/Cas9 系统是一种强大的基因组定向编辑和基因调控技术。然而,高效单导 RNA(sgRNA)的设计仍具有挑战性,需要考虑许多标准。在本节中,我们将介绍如何使用 CRISPR-ERA 设计 sgRNA 序列并构建全基因组 sgRNA 文库。CRISPR-ERA 是最先进的 sgRNA 设计器网络服务器工具之一,它基于一套从已发表报告中总结出的 sgRNA 设计规则。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Methods in molecular biology
Methods in molecular biology Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
2.00
自引率
0.00%
发文量
3536
期刊介绍: For over 20 years, biological scientists have come to rely on the research protocols and methodologies in the critically acclaimed Methods in Molecular Biology series. The series was the first to introduce the step-by-step protocols approach that has become the standard in all biomedical protocol publishing. Each protocol is provided in readily-reproducible step-by-step fashion, opening with an introductory overview, a list of the materials and reagents needed to complete the experiment, and followed by a detailed procedure that is supported with a helpful notes section offering tips and tricks of the trade as well as troubleshooting advice.
期刊最新文献
Assessing Epidermal Permeability in Lymphedema Skin with Sulfo-NHS-Biotin Immunofluorescent Penetration Assay. Differentiation of Retinal Pigment Epithelium (RPE) and Retinal Organoids from Human iPSCs. Hydrogen-Deuterium Exchange Coupled to Mass Spectrometry-Based Analysis of Phytochrome Photoreceptors. A 3D Co-Culture Model of Endometrial Carcinoma Cells with Peripheral Blood Immune Cells (PBMCs) to Study the Activity of Immune Checkpoint Inhibitors. An Indigenous Workflow for Generating CD19 CAR-T Cells.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1