Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas.

4区 医学 Q4 Medicine BMC Medical Genetics Pub Date : 2020-10-22 DOI:10.1186/s12881-020-01099-7
Xianping Meng, Hongyan Lu, Xia Jiang, Bin Huang, Song Wu, Guiping Yu, Hongbao Cao
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引用次数: 2

Abstract

Background: Previous studies indicated a strong association between hyperkalemia and lung squamous cell carcinomas (LSCC). However, the underlying mechanism is not fully understood so far.

Methods: Literature-based data mining was conducted to identify genes, molecule, and cell processes linked to both hyperkalemia and LSCC. Pathway analysis was performed to explore the interactive network, common-target network, and common-regulator network for both disorders. Then, a mega-analysis using 11 independent LSCC RNA expression datasets (358 LSCCs and 278 healthy controls) was performed to test the hypothesis that genes influencing hyperkalemia may also play roles in LSCC.

Results: There was a significant overlap between the genes implicated with both diseases (20 genes, p-value = 4.98e-15), which counts for 16% of all hyperkalemia genes (125 genes). Network analysis identified 12 molecules as common targets for hyperkalemia and LSCC, and 19 molecules as common regulators. Moreover, 19 molecules were identified within an interactive network, through which hyperkalemia and LSCC could exert influence on each other. In addition, meta-analysis identified one hyperkalemia promoter, SPP1, as a novel contributor for LSCC (LFC = 2.64; p-value = 2.81e-6). MLR analysis suggests geographical region as an influential factor for the expression levels of SPP1 in LSCC patients (p value = 0.036, 0.054).

Conclusion: Our results showed that there was a common molecular basis for the pathology of both hyperkalemia and LSCC, and that genes promoting hyperkalemia might also play roles in the development of LSCC. However, this study did not suggest hypercalcemia as a casual factor for LSCC.

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了解高钾血症与肺鳞状细胞癌的分子关系。
背景:以往的研究表明高钾血症与肺鳞状细胞癌(LSCC)有很强的相关性。然而,到目前为止,其潜在的机制还没有被完全理解。方法:基于文献的数据挖掘进行鉴定基因,分子和细胞过程与高钾血症和LSCC。通过通路分析来探索两种疾病的相互作用网络、共同目标网络和共同调节网络。然后,使用11个独立的LSCC RNA表达数据集(358个LSCC和278个健康对照)进行大型分析,以验证影响高钾血症的基因也可能在LSCC中发挥作用的假设。结果:与两种疾病相关的基因存在显著重叠(20个基因,p值= 4.98e-15),占所有高钾血症基因(125个基因)的16%。网络分析发现12个分子是高钾血症和LSCC的共同靶点,19个分子是共同的调节分子。此外,在一个相互作用的网络中鉴定了19个分子,通过这个网络,高钾血症和LSCC可以相互影响。此外,荟萃分析发现一个高钾血症启动子SPP1是LSCC的新贡献者(LFC = 2.64;p值= 2.81e-6)。MLR分析显示地理区域是影响LSCC患者SPP1表达水平的因素(p值= 0.036,0.054)。结论:我们的研究结果表明,高钾血症和LSCC的病理存在共同的分子基础,促进高钾血症的基因也可能在LSCC的发生发展中发挥作用。然而,这项研究并没有表明高钙血症是LSCC的一个偶然因素。
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来源期刊
BMC Medical Genetics
BMC Medical Genetics 医学-遗传学
自引率
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审稿时长
12 months
期刊介绍: BMC Medical Genetics is an open access journal publishing original peer-reviewed research articles in the effects of genetic variation in individuals, families and among populations in relation to human health and disease. Note: BMC Medical Genetics is now closed. This journal has merged with BMC Medical Genomics, a broad-scope, open access community journal for all medical genetics and genomics research.
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