Contrasting Patterns of Gene Duplication, Relocation, and Selection Among Human Taste Genes.

IF 1.7 4区 生物学 Q4 EVOLUTIONARY BIOLOGY Evolutionary Bioinformatics Pub Date : 2021-07-24 eCollection Date: 2021-01-01 DOI:10.1177/11769343211035141
Yupeng Wang, Ying Sun, Paule Valery Joseph
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引用次数: 2

Abstract

In humans, taste genes are responsible for perceiving at least 5 different taste qualities. Human taste genes' evolutionary mechanisms need to be explored. We compiled a list of 69 human taste-related genes and divided them into 7 functional groups. We carried out comparative genomic and evolutionary analyses for these taste genes based on 8 vertebrate species. We found that relative to other groups of human taste genes, human TAS2R genes have a higher proportion of tandem duplicates, suggesting that tandem duplications have contributed significantly to the expansion of the human TAS2R gene family. Human TAS2R genes tend to have fewer collinear genes in outgroup species and evolve faster, suggesting that human TAS2R genes have experienced more gene relocations. Moreover, human TAS2R genes tend to be under more relaxed purifying selection than other genes. Our study sheds new insights into diverse and contrasting evolutionary patterns among human taste genes.

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人类味觉基因中基因复制、重新定位和选择的对比模式
在人类中,味觉基因负责感知至少5种不同的味觉品质。人类味觉基因的进化机制有待探索。我们编制了一份69个人类味觉相关基因的清单,并将它们分为7个功能组。我们对8种脊椎动物的味觉基因进行了比较基因组和进化分析。我们发现,相对于其他人类味觉基因群体,人类TAS2R基因具有更高的串联重复比例,这表明串联重复对人类TAS2R基因家族的扩展做出了重大贡献。人类TAS2R基因在群外物种中共线基因较少,进化速度较快,表明人类TAS2R基因经历了更多的基因重定位。此外,人类TAS2R基因比其他基因更容易受到更宽松的净化选择。我们的研究为人类味觉基因的多样化和对比的进化模式提供了新的见解。
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来源期刊
Evolutionary Bioinformatics
Evolutionary Bioinformatics 生物-进化生物学
CiteScore
4.20
自引率
0.00%
发文量
25
审稿时长
12 months
期刊介绍: Evolutionary Bioinformatics is an open access, peer reviewed international journal focusing on evolutionary bioinformatics. The journal aims to support understanding of organismal form and function through use of molecular, genetic, genomic and proteomic data by giving due consideration to its evolutionary context.
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