Subcellular Proteomics to Understand Promotive Effect of Plant-Derived Smoke Solution on Soybean Root.

IF 4 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Proteomes Pub Date : 2021-10-02 DOI:10.3390/proteomes9040039
Yusuke Murashita, Takumi Nishiuchi, Shafiq Ur Rehman, Setsuko Komatsu
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引用次数: 5

Abstract

Plant-derived smoke solution enhances soybean root growth; however, its mechanism is not clearly understood. Subcellular proteomics techniques were used for underlying roles of plant-derived smoke solution on soybean root growth. The fractions of membrane and nucleus were purified and evaluated for purity. ATPase and histone were enriched in the fractions of membrane and nucleus, respectively. Principal component analysis of proteomic results indicated that the plant-derived smoke solution affected the proteins in the membrane and nucleus. The proteins in the membrane and nucleus mainly increased and decreased, respectively, by the treatment of plant-derived smoke solution compared with control. In the proteins in the plasma membrane, ATPase increased, which was confirmed by immunoblot analysis, and ATP contents increased through the treatment of plant-derived smoke solution. Additionally, although the nuclear proteins mainly decreased, the expression of RNA polymerase II was up-regulated through the treatment of plant-derived smoke solution. These results indicate that plant-derived smoke solution enhanced soybean root growth through the transcriptional promotion with RNA polymerase II expression and the energy production with ATPase accumulation.

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亚细胞蛋白质组学研究植物源烟熏液对大豆根系的促进作用。
植物源烟熏液促进大豆根系生长然而,其机制尚不清楚。亚细胞蛋白质组学技术用于研究植物源烟液对大豆根系生长的潜在作用。对膜和细胞核部分进行纯化和纯度评价。细胞膜和细胞核部分分别富集atp酶和组蛋白。蛋白质组学的主成分分析结果表明,植物源烟溶液对膜和细胞核中的蛋白质有影响。与对照相比,植物源性烟熏液处理后,膜和细胞核中的蛋白质含量分别增加和减少。在质膜蛋白中,ATP酶增加,免疫印迹分析证实,通过植物源烟液处理,ATP含量增加。此外,虽然核蛋白主要减少,但通过植物源烟液处理,RNA聚合酶II的表达上调。这些结果表明,植物源性烟液通过转录促进RNA聚合酶II的表达和atp酶积累的能量生产来促进大豆根系生长。
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来源期刊
Proteomes
Proteomes Biochemistry, Genetics and Molecular Biology-Clinical Biochemistry
CiteScore
6.50
自引率
3.00%
发文量
37
审稿时长
11 weeks
期刊介绍: Proteomes (ISSN 2227-7382) is an open access, peer reviewed journal on all aspects of proteome science. Proteomes covers the multi-disciplinary topics of structural and functional biology, protein chemistry, cell biology, methodology used for protein analysis, including mass spectrometry, protein arrays, bioinformatics, HTS assays, etc. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the length of papers. Scope: -whole proteome analysis of any organism -disease/pharmaceutical studies -comparative proteomics -protein-ligand/protein interactions -structure/functional proteomics -gene expression -methodology -bioinformatics -applications of proteomics
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