Molecular docking of bioactive compounds derived from Moringa oleifera with p53 protein in the apoptosis pathway of oral squamous cell carcinoma.

Q2 Agricultural and Biological Sciences Genomics and Informatics Pub Date : 2021-12-01 Epub Date: 2021-12-31 DOI:10.5808/gi.21062
Sonali Rath, Manaswini Jagadeb, Ruchi Bhuyan
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Abstract

Moringa oleifera is nowadays raising as the most preferred medicinal plant, as every part of the moringa plant has potential bioactive compounds which can be used as herbal medicines. Some bioactive compounds of M. oleifera possess potential anti-cancer properties which interact with the apoptosis protein p53 in cancer cell lines of oral squamous cell carcinoma. This research work focuses on the interaction among the selected bioactive compounds derived from M. oleifera with targeted apoptosis protein p53 from the apoptosis pathway to check whether the bioactive compound will induce apoptosis after the mutation in p53. To check the toxicity and drug-likeness of the selected bioactive compound derived from M. oleifera based on Lipinski's Rule of Five. Detailed analysis of the 3D structure of apoptosis protein p53. To analyze protein's active site by CASTp 3.0 server. Molecular docking and binding affinity were analyzed between protein p53 with selected bioactive compounds in order to find the most potential inhibitor against the target. This study shows the docking between the potential bioactive compounds with targeted apoptosis protein p53. Quercetin was the most potential bioactive compound whereas kaempferol shows poor affinity towards the targeted p53 protein in the apoptosis pathway. Thus, the objective of this research can provide an insight prediction towards M. oleifera derived bioactive compounds and target apoptosis protein p53 in the structural analysis for compound isolation and in-vivo experiments on the cancer cell line.

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从油辣木中提取的生物活性化合物与口腔鳞状细胞癌凋亡途径中的 p53 蛋白的分子对接。
油辣木是时下最受青睐的药用植物,因为油辣木草的每个部分都具有潜在的生物活性化合物,可用作草药。油橄榄的一些生物活性化合物具有潜在的抗癌特性,能与口腔鳞状细胞癌细胞系中的凋亡蛋白 p53 相互作用。这项研究工作的重点是从油橄榄中提取的生物活性化合物与凋亡途径中的靶向凋亡蛋白 p53 之间的相互作用,以检查生物活性化合物是否会在 p53 发生突变后诱导细胞凋亡。根据利宾斯基五则检验所选油橄榄生物活性化合物的毒性和药物亲和性。详细分析凋亡蛋白 p53 的三维结构。利用 CASTp 3.0 服务器分析蛋白质的活性位点。分析 p53 蛋白与选定的生物活性化合物之间的分子对接和结合亲和力,以找到最有潜力的目标抑制剂。本研究显示了潜在生物活性化合物与目标凋亡蛋白 p53 之间的对接。槲皮素是最有潜力的生物活性化合物,而山奈酚与凋亡途径中的目标 p53 蛋白的亲和性较差。因此,这项研究的目的是在化合物分离的结构分析和体内癌细胞系实验中,对油橄榄提取的生物活性化合物和靶向凋亡蛋白 p53 进行深入预测。
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来源期刊
Genomics and Informatics
Genomics and Informatics Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
1.90
自引率
0.00%
发文量
0
审稿时长
12 weeks
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