CCR5 as a prognostic biomarker correlated with immune infiltrates in head and neck squamous cell carcinoma by bioinformatic study.

IF 2.7 3区 生物学 Hereditas Pub Date : 2022-09-27 DOI:10.1186/s41065-022-00251-y
Chunhong Li, Shanlin Chen, Chuanyu Liu, Chune Mo, Weiwei Gong, Jiahua Hu, Min He, Lei Xie, Xianliang Hou, Jianhong Tang, Minglin Ou
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引用次数: 2

Abstract

Background: C-C chemokine receptor 5 (CCR5) has recently been recognized as an underlying therapeutic target for various malignancies. However, the association of CCR5 with prognosis in the head and neck squamous cell carcinoma (HNSC) patients and tumor-infiltrating lymphocytes (TILs) is unclear.

Methods: In the current experiment, methods such as the Tumor Immune Estimation Resource Analysis (TIMER), Gene Expression Profiling Interactive Analysis (GEPIA), UALCAN, and Kaplan-Meier plotter Analysis were used to comprehensively evaluate the expression of CCR5 in human various malignancies and the clinical prognosis in HNSC patients. Subsequently, we used the TIMER database and the TISIDB platform to investigate the correlation between CCR5 expression levels and immune cell infiltration in the HNSC tumor microenvironment. Furthermore, immunomodulatory and chemokine profiling were performed using the TISIDB platform to analyse the correlation between CCR5 expression levels and immunomodulation in HNSC patients.

Results: We found that CCR5 expression in HNSC tumor tissues was significantly upregulated than in normal tissues. In HNSC, patients with high CCR5 expression levels had worse overall survival (OS, HR = 0.59, p = 0.00015) and worse recurrence-free survival (RFS, HR = 3.27, p = 0.00098). Upregulation of CCR5 expression is closely associated with immunomodulators, chemokines, and infiltrating levels of CD4+ T cells, neutrophils, macrophages, and myeloid dendritic cells. Furthermore, upregulated CCR5 was significantly associated with different immune markers in the immune cell subsets of HNSC.

Conclusions: High expression of CCR5 plays an important prognostic role in HNSC patients and may serve as a prognostic biomarker correlated with immune infiltration, and further studies are still needed to investigate therapeutic targeting HNSC patients in the future.

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CCR5作为头颈部鳞状细胞癌免疫浸润预后生物标志物的生物信息学研究
背景:C-C趋化因子受体5 (CCR5)最近被认为是多种恶性肿瘤的潜在治疗靶点。然而,CCR5与头颈部鳞状细胞癌(HNSC)患者和肿瘤浸润淋巴细胞(til)预后的关系尚不清楚。方法:本实验采用肿瘤免疫估计资源分析(Tumor Immune Estimation Resource Analysis, TIMER)、基因表达谱交互分析(Gene Expression Profiling Interactive Analysis, GEPIA)、UALCAN、Kaplan-Meier plotter Analysis等方法,综合评价CCR5在人类各种恶性肿瘤中的表达及HNSC患者的临床预后。随后,我们利用TIMER数据库和TISIDB平台研究了HNSC肿瘤微环境中CCR5表达水平与免疫细胞浸润的相关性。此外,使用TISIDB平台进行免疫调节和趋化因子分析,以分析HNSC患者CCR5表达水平与免疫调节之间的相关性。结果:我们发现CCR5在HNSC肿瘤组织中的表达明显高于正常组织。在HNSC中,高CCR5表达水平的患者总生存期较差(OS, HR = 0.59, p = 0.00015),无复发生存期较差(RFS, HR = 3.27, p = 0.00098)。CCR5表达上调与免疫调节剂、趋化因子以及CD4+ T细胞、中性粒细胞、巨噬细胞和骨髓树突状细胞的浸润水平密切相关。此外,上调的CCR5与HNSC免疫细胞亚群中的不同免疫标记物显著相关。结论:CCR5高表达在HNSC患者中具有重要的预后作用,可能是与免疫浸润相关的预后生物标志物,未来针对HNSC患者的治疗仍需进一步研究。
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来源期刊
Hereditas
Hereditas Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.80
自引率
3.70%
发文量
0
期刊介绍: For almost a century, Hereditas has published original cutting-edge research and reviews. As the Official journal of the Mendelian Society of Lund, the journal welcomes research from across all areas of genetics and genomics. Topics of interest include human and medical genetics, animal and plant genetics, microbial genetics, agriculture and bioinformatics.
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