Evaluation of Serotyping of Environmental and Clinical Isolates of Legionella pneumophila using MALDI-TOF MS.

IF 0.9 4区 农林科学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biocontrol science Pub Date : 2022-01-01 DOI:10.4265/bio.27.81
Kazuyuki Sogawa, Naoto Ishizaki, Takayuki Ishige, Syota Murata, Toshibumi Taniguchi, Katsunori Furuhata
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引用次数: 1

Abstract

Legionella pneumophila (L. pneumophila) is responsible for most Legionnaire's disease cases diagnosed worldwide. The species includes 16 serogroups, but most Legionnaire's disease cases (85.7% in Europe, 87.0% in Japan) are caused by L. pneumophila serogroup 1. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) can be used to identify the L. pneumophila serogroup. In this study, we compared three sample preparation methods that are compatible with MALDI-TOF MS: the direct colony transfer method (DCTM), on-target extraction method (OTEM), and in-tube extraction method (ITEM). The aim was to improve the low identification rates for L. pneumophila, and establish and validate a simple, rapid and robust MALDI-TOF MS-based method for routine use in microbiological laboratories for assignment of L. pneumophila isolates to serogroups and identification of reliable peak biomarkers. Using ITEM, 100.0% (29/29) of hot spring water samples and clinical isolates were correctly identified at the species level. Augmented reference spectra correctly identified all 29 strains at the species level and 29 isolates at the serogroup level, displaying sensitivity, specificity and accuracy of 100.0% for serogroup assignment. MALDI-TOF MS is a relatively inexpensive method for assignment of L. pneumophila serogroups that can serve as a first-line tool for rapid prospective typing.

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用MALDI-TOF质谱评价嗜肺军团菌环境和临床分离株血清分型。
嗜肺军团菌(L. pneumophila)是全世界诊断的大多数军团病病例的罪魁祸首。该菌种包括16个血清群,但大多数军团病病例(欧洲85.7%,日本87.0%)是由嗜肺乳杆菌血清1群引起的。基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)可用于鉴定嗜肺乳杆菌血清群。在本研究中,我们比较了与MALDI-TOF MS兼容的三种样品制备方法:直接菌落转移法(DCTM)、靶上提取法(OTEM)和管内提取法(ITEM)。目的是改善嗜肺乳杆菌的低识别率,建立并验证一种简单、快速、可靠的基于MALDI-TOF质谱的方法,用于微生物实验室的常规使用,用于嗜肺乳杆菌分离物的血清群分配和可靠的峰生物标志物鉴定。采用ITEM方法,100.0%(29/29)的温泉水样品和临床分离株在菌种水平上的正确率达到100%。扩增的参考光谱在种水平上正确鉴定了29株菌株,在血清群水平上正确鉴定了29株分离株,血清群鉴定的敏感性、特异性和准确性均为100.0%。MALDI-TOF质谱是一种相对便宜的嗜肺乳杆菌血清群分配方法,可以作为快速前瞻性分型的一线工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biocontrol science
Biocontrol science BIOTECHNOLOGY & APPLIED MICROBIOLOGY-
CiteScore
2.60
自引率
8.30%
发文量
21
审稿时长
>12 weeks
期刊介绍: The Biocontrol Science provides a medium for the publication of original articles, concise notes, and review articles on all aspects of science and technology of biocontrol.
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