Detection of OXA-181-producing Pseudomonas aeruginosa in Germany

IF 4.5 3区 医学 Q1 MICROBIOLOGY International Journal of Medical Microbiology Pub Date : 2022-07-01 DOI:10.1016/j.ijmm.2022.151557
Jennifer Schauer , Sören G. Gatermann, Jessica Eisfeld, Jörg Hans, Niels Pfennigwerth
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引用次数: 2

Abstract

Objectives

To report the detection of the class D carbapenemase OXA-181 in an MDR clinical Pseudomonas aeruginosa isolate in Germany.

Methods

Carbapenemase detection was performed by using several phenotypic tests such as the modified Hodge test, a combined disc test with boronic acid, EDTA or cloxacillin, a lysate-based inhibition assays and by PCR for common and rare carbapenemase genes. Antibiotic susceptibilities were determined by broth microdilution. The genetic environment of blaOXA-181 in the clinical P. aeruginosa isolate was characterised by Illumina and MinION sequencing.

Results

An multidrug-resistant P. aeruginosa was isolated from a tracheal swab in 2019 and was sent to the German National Reference Centre for multidrug-resistant Gram-negative bacteria for carbapenemase detection. Several phenotypic tests indicated the presence of a carbapenemase which was not inhibited by EDTA nor by boronic acid. PCRs for common and rare carbapenemase genes revealed the presence of a blaOXA-181 gene. WGS data confirmed that the gene was located on the chromosome as part of a Tn2013 transposon. The genetic organisation of blaOXA-181 has already been described in a P. aeruginosa isolate from England, but both isolates differed significantly in their sequence types (ST111/ST235). Analysis of the genetic environment of the blaOXA-181 gene also revealed high homology to a plasmid from a Klebsiella pneumoniae isolate.

Conclusions

To our knowledge, this is the first report of blaOXA-181 in a clinical P. aeruginosa isolate in Germany which emphasises the ongoing spread of yet unusual carbapenemases among different Gram-negative species and therefore complicating their detection in routine laboratories.

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产oxa -181的铜绿假单胞菌在德国的检测
目的报道德国一株耐多药铜绿假单胞菌临床分离株中D类碳青霉烯酶OXA-181的检测结果。方法采用改良的霍奇试验、硼酸、EDTA或氯氯西林联合圆盘试验、裂解物抑制试验和PCR对常见和罕见碳青霉烯酶基因进行检测。采用微量肉汤稀释法测定药敏。利用Illumina和MinION测序对临床铜绿假单胞菌分离株blaOXA-181的遗传环境进行了表征。结果2019年从气管拭子中分离到1株耐多药铜绿假单胞菌,送往德国国家耐多药革兰氏阴性菌参考中心进行碳青霉烯酶检测。几项表型试验表明,碳青霉烯酶的存在不被EDTA和硼酸抑制。对常见和罕见碳青霉烯酶基因进行pcr检测,发现存在blaOXA-181基因。WGS数据证实该基因位于染色体上Tn2013转座子的一部分。blaOXA-181的遗传组织已经在英国的铜绿假单胞菌分离物中被描述,但两个分离物在序列类型(ST111/ST235)上存在显著差异。blaOXA-181基因的遗传环境分析也显示其与肺炎克雷伯菌分离株的质粒具有高度同源性。结论:据我们所知,这是德国临床铜绿假单胞菌分离株中首次报道blaOXA-181,这强调了不同革兰氏阴性菌种中碳青霉烯酶的持续传播,因此使其在常规实验室中的检测复杂化。
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来源期刊
CiteScore
9.70
自引率
0.00%
发文量
18
审稿时长
45 days
期刊介绍: Pathogen genome sequencing projects have provided a wealth of data that need to be set in context to pathogenicity and the outcome of infections. In addition, the interplay between a pathogen and its host cell has become increasingly important to understand and interfere with diseases caused by microbial pathogens. IJMM meets these needs by focussing on genome and proteome analyses, studies dealing with the molecular mechanisms of pathogenicity and the evolution of pathogenic agents, the interactions between pathogens and host cells ("cellular microbiology"), and molecular epidemiology. To help the reader keeping up with the rapidly evolving new findings in the field of medical microbiology, IJMM publishes original articles, case studies and topical, state-of-the-art mini-reviews in a well balanced fashion. All articles are strictly peer-reviewed. Important topics are reinforced by 2 special issues per year dedicated to a particular theme. Finally, at irregular intervals, current opinions on recent or future developments in medical microbiology are presented in an editorial section.
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