Role of lone-pair electron localization in temperature-induced phase transitions in mimetite.

IF 1.3 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Acta crystallographica Section B, Structural science, crystal engineering and materials Pub Date : 2022-08-01 Epub Date: 2022-07-09 DOI:10.1107/S2052520622006254
Georgia Cametti, Mariko Nagashima, Sergey V Churakov
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Abstract

The crystal structure of mimetite Pb5(AsO4)3Cl, a phosphate with apatite structure-type has been investigated in situ at 123, 173, 273, 288, 353 and 393 K. A careful inspection of the diffraction pattern and subsequent structure refinements indicated that mimetite transforms from the monoclinic to the hexagonal polymorph with increasing temperature. At 123 K, a monoclinic superstructure, mimetite-2M, with cell parameters a = 20.4487 (9),  b = 7.4362 (2), c = 20.4513 (9) Å, β = 119.953 (6)°, V = 2694.5 (2) Å3 and space group P21 was observed. From 173 to 353 K, the reflections of the supercell were evident only along one direction of the corresponding hexagonal apatite-cell and the structure transforms to the polymorph mimetite-M with space group P21/b and unit-cell parameters a = 10.2378 (3), b = 20.4573 (7), c = 7.4457 (2) Å, β = 120.039 (5)°, V = 1349.96 (9) Å3. Only at higher temperature, i.e. 393 K, does mimetite adopt the hexagonal space group P63/m characteristic of apatite structure-types. The role of the electron lone pairs of Pb atoms in the phase transition was investigated through the analysis of the electron localization function (ELF) calculated based on the DFT-geometry optimized structures of the three polymorphs. The changes in spatial distribution of the 6s2 electron density during the phase transitions were explored by means of the Wannier Function Centres (WFCs) derived from ab initio molecular dynamics trajectories. In the high-temperature hexagonal structure the 6s2 electrons are spherically symmetric relative to the position of Pb atoms. At low temperature the maximum of 6s2 electron density is displaced relative to the position of Pb atom contributing to the polar interaction in the monoclinic polymorphs.

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孤对电子定位在温度诱导的麦饭石相变中的作用。
在 123、173、273、288、353 和 393 K 温度下,对具有磷灰石结构类型的磷灰石 Pb5(AsO4)3Cl 的晶体结构进行了原位研究。对衍射图样的仔细检查和随后的结构细化表明,随着温度的升高,闪锌矿从单斜多晶型转变为六方多晶型。在 123 K 时,观察到单斜超结构 mimetite-2M,晶胞参数 a = 20.4487 (9),b = 7.4362 (2),c = 20.4513 (9)埃,β = 119.953 (6)°,V = 2694.5 (2)埃3,空间群 P21。从 173 K 到 353 K,超级晶胞的反射仅沿相应六方磷灰石晶胞的一个方向明显,结构转变为多晶型闪长岩-M,空间群为 P21/b,单位晶胞参数为 a = 10.2378 (3)、b = 20.4573 (7)、c = 7.4457 (2) Å、β = 120.039 (5)°、V = 1349.96 (9) Å3。只有在较高的温度下,即 393 K 时,闪长岩才具有磷灰石结构类型所特有的六方空间群 P63/m。通过分析根据三种多晶体的 DFT 几何优化结构计算出的电子局域函数 (ELF),研究了铅原子的电子孤对在相变中的作用。通过从ab initio分子动力学轨迹得出的万尼尔函数中心(WFCs),研究了相变过程中6s2电子密度空间分布的变化。在高温六边形结构中,6s2 电子相对于铅原子的位置呈球形对称。在低温条件下,6s2 电子密度的最大值相对于铅原子的位置发生位移,从而导致单斜多晶体中的极性相互作用。
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来源期刊
Acta crystallographica Section B, Structural science, crystal engineering and materials
Acta crystallographica Section B, Structural science, crystal engineering and materials CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
3.60
自引率
5.30%
发文量
0
期刊介绍: Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials publishes scientific articles related to the structural science of compounds and materials in the widest sense. Knowledge of the arrangements of atoms, including their temporal variations and dependencies on temperature and pressure, is often the key to understanding physical and chemical phenomena and is crucial for the design of new materials and supramolecular devices. Acta Crystallographica B is the forum for the publication of such contributions. Scientific developments based on experimental studies as well as those based on theoretical approaches, including crystal-structure prediction, structure-property relations and the use of databases of crystal structures, are published.
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