Virologs, viral mimicry, and virocell metabolism: the expanding scale of cellular functions encoded in the complex genomes of giant viruses.

IF 2.2 4区 生物学 Q3 MICROBIOLOGY Fems Microbiology Letters Pub Date : 2023-09-05 DOI:10.1093/femsre/fuad053
Mohammad Moniruzzaman, Maria Paula Erazo Garcia, Roxanna Farzad, Anh D Ha, Abdeali Jivaji, Sangita Karki, Uri Sheyn, Joshua Stanton, Benjamin Minch, Danae Stephens, Dustin C Hancks, Rodrigo A L Rodrigues, Jonatas S Abrahao, Assaf Vardi, Frank O Aylward
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Abstract

The phylum Nucleocytoviricota includes the largest and most complex viruses known. These "giant viruses" have a long evolutionary history that dates back to the early diversification of eukaryotes, and over time they have evolved elaborate strategies for manipulating the physiology of their hosts during infection. One of the most captivating of these mechanisms involves the use of genes acquired from the host-referred to here as viral homologs or "virologs"-as a means of promoting viral propagation. The best-known examples of these are involved in mimicry, in which viral machinery "imitates" immunomodulatory elements in the vertebrate defense system. But recent findings have highlighted a vast and rapidly expanding array of other virologs that include many genes not typically found in viruses, such as those involved in translation, central carbon metabolism, cytoskeletal structure, nutrient transport, vesicular trafficking, and light harvesting. Unraveling the roles of virologs during infection as well as the evolutionary pathways through which complex functional repertoires are acquired by viruses are important frontiers at the forefront of giant virus research.

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病毒学、病毒拟态和病毒细胞代谢:巨型病毒复杂基因组中编码的细胞功能不断扩大。
核细胞病毒门包括已知的最大和最复杂的病毒。这些“巨型病毒”有着悠久的进化史,可以追溯到真核生物的早期多样化,随着时间的推移,它们进化出了在感染期间操纵宿主生理的精细策略。其中最吸引人的机制之一是利用从宿主获得的基因——这里称为病毒同源物或“病毒学”——作为促进病毒传播的手段。其中最著名的例子涉及拟态,即病毒机制“模仿”脊椎动物防御系统中的免疫调节元件。但最近的发现突显了一系列广泛且迅速扩展的其他病毒,其中包括许多病毒中通常没有的基因,如参与翻译、中心碳代谢、细胞骨架结构、营养运输、囊泡运输和光捕获的基因。解开病毒学家在感染过程中的作用,以及病毒获得复杂功能库的进化途径,是巨型病毒研究的重要前沿。
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来源期刊
Fems Microbiology Letters
Fems Microbiology Letters 生物-微生物学
CiteScore
4.30
自引率
0.00%
发文量
112
审稿时长
1.9 months
期刊介绍: FEMS Microbiology Letters gives priority to concise papers that merit rapid publication by virtue of their originality, general interest and contribution to new developments in microbiology. All aspects of microbiology, including virology, are covered. 2019 Impact Factor: 1.987, Journal Citation Reports (Source Clarivate, 2020) Ranking: 98/135 (Microbiology) The journal is divided into eight Sections: Physiology and Biochemistry (including genetics, molecular biology and ‘omic’ studies) Food Microbiology (from food production and biotechnology to spoilage and food borne pathogens) Biotechnology and Synthetic Biology Pathogens and Pathogenicity (including medical, veterinary, plant and insect pathogens – particularly those relating to food security – with the exception of viruses) Environmental Microbiology (including ecophysiology, ecogenomics and meta-omic studies) Virology (viruses infecting any organism, including Bacteria and Archaea) Taxonomy and Systematics (for publication of novel taxa, taxonomic reclassifications and reviews of a taxonomic nature) Professional Development (including education, training, CPD, research assessment frameworks, research and publication metrics, best-practice, careers and history of microbiology) If you are unsure which Section is most appropriate for your manuscript, for example in the case of transdisciplinary studies, we recommend that you contact the Editor-In-Chief by email prior to submission. Our scope includes any type of microorganism - all members of the Bacteria and the Archaea and microbial members of the Eukarya (yeasts, filamentous fungi, microbial algae, protozoa, oomycetes, myxomycetes, etc.) as well as all viruses.
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