A Robust and Standardized Approach to Quantify Wound Closure Using the Scratch Assay.

IF 2.3 Q3 BIOCHEMICAL RESEARCH METHODS Methods and Protocols Pub Date : 2023-09-17 DOI:10.3390/mps6050087
Stefan Balko, Evan Kerr, Edward Buchel, Sarvesh Logsetty, Afshin Raouf
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Abstract

The scratch assay is an in vitro assay that allows for high-throughput quantification of wound closure by keratinocytes and fibroblasts with relative ease. However, this assay is amenable to experimental variables, which can result in false-positive and false-negative data, making the interpretation of such data difficult. Also, data variability decreases the sensitivity of the scratch assay. Here, we identify important sources of data variation in the scratch assay and provide rational mitigation strategies that enable robust and highly reproducible quantification of scratch width and area, and ultimately the scratch closure rates. By eliminating these sources of variability, the sensitivity of the scratch assay is enhanced, thereby allowing for identification of dependent variables with wide-ranging impacts on wound closure in a robust and standardized manner.

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一种稳健和标准化的方法来量化伤口闭合使用划痕测定。
划痕试验是一种体外试验,允许相对容易地对角质形成细胞和成纤维细胞的伤口闭合进行高通量定量。然而,这种测定法适用于实验变量,这可能导致假阳性和假阴性数据,从而使对这些数据的解释变得困难。此外,数据可变性降低了划痕测定的灵敏度。在这里,我们确定了划痕试验中数据变化的重要来源,并提供了合理的缓解策略,从而能够对划痕宽度和面积进行稳健且高度可重复的量化,并最终确定划痕闭合率。通过消除这些变异源,划痕试验的灵敏度得到了提高,从而能够以稳健和标准化的方式识别对伤口闭合有广泛影响的因变量。
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来源期刊
Methods and Protocols
Methods and Protocols Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (miscellaneous)
CiteScore
3.60
自引率
0.00%
发文量
85
审稿时长
8 weeks
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