A comparative proteomic analysis for non-invasive early prediction of hypoxic-ischemic injury in asphyxiated neonates.

IF 2.1 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS PROTEOMICS – Clinical Applications Pub Date : 2024-03-01 Epub Date: 2023-10-03 DOI:10.1002/prca.202200054
Sumrati Gurtoo, Gayathree Karthikkeyan, Santosh Kumar Behera, Chinmaya Narayana Kotimoole, Mohd Altaf Najar, Prashant Kumar Modi, Sahana Ks, Sneha M Pinto, Arun Ab
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Abstract

Aim: Hypoxic Ischemic Encephalopathy (HIE) is one of the principal causes of neonatal mortality and long-term morbidity worldwide. The neonatal signs of mild cerebral injury are subtle, making an early precise diagnosis difficult. Delayed detection, poor prognosis, and lack of specific biomarkers for the disease are increasing mortality rates. In this study, we intended to identify specific biomarkers using comparative proteomic analysis to predict the severity of perinatal asphyxia so that its outcome can also be prevented.

Experimental design: A case-control study was conducted on 38 neonates, and urine samples were collected within 24 and 72 h of life. A tandem mass spectrometry-based quantitative proteomics approach, followed by validation via sandwich ELISA, was performed.

Results: The LC-MS/MS-based proteomics analysis resulted in the identification of 1201 proteins in urine, with 229, 244, and 426 being differentially expressed in HIE-1, HIE-2, and HIE-3, respectively. Axon guidance, Diseases of programmed cell death, and Detoxification of reactive oxygen species pathways were significantly enriched in mild HIE versus severe HIE. Among the differentially expressed proteins in various stages of HIE, we chose to validate four proteins - APP, AGT, FABP1, and FN1 - via sandwich ELISA. Individual and cumulative ROC curves were plotted. AGT and FABP1 together showed high sensitivity, specificity, and accuracy as potential biomarkers for early diagnosis of HIE.

Conclusion: Establishing putative urinary biomarkers will facilitate clinicians to more accurately screen neonates for brain injury and monitor the disease progression. Prompt treatment of neonates may reduce mortality and neurodevelopmental impairment.

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无创早期预测窒息新生儿缺氧缺血性损伤的比较蛋白质组学分析。
目的:缺氧缺血性脑病(HIE)是全球新生儿死亡和长期发病的主要原因之一。轻度脑损伤的新生儿体征很微妙,因此很难进行早期精确诊断。检测延迟、预后差以及缺乏该疾病的特异性生物标志物正在增加死亡率。在这项研究中,我们打算使用比较蛋白质组学分析来确定特定的生物标志物,以预测围产期窒息的严重程度,从而也可以预防其结果。实验设计:对38名新生儿进行病例对照研究,并在出生后24和72小时内采集尿液样本。进行了基于串联质谱的定量蛋白质组学方法,然后通过夹心ELISA进行验证。结果:基于LC-MS/MS的蛋白质组学分析在尿液中鉴定出1201种蛋白质,其中229种、244种和426种分别在HIE-1、HIE-2和HIE-3中差异表达。Axon指导、程序性细胞死亡疾病和活性氧途径的解毒在轻度HIE和重度HIE中显著富集。在HIE不同阶段的差异表达蛋白中,我们选择通过夹心ELISA验证四种蛋白——APP、AGT、FABP1和FN1。绘制个体和累积ROC曲线。AGT和FABP1作为HIE早期诊断的潜在生物标志物,具有较高的敏感性、特异性和准确性。结论:建立假定的尿液生物标志物将有助于临床医生更准确地筛查新生儿脑损伤并监测疾病进展。及时治疗新生儿可以降低死亡率和神经发育障碍。
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来源期刊
PROTEOMICS – Clinical Applications
PROTEOMICS – Clinical Applications 医学-生化研究方法
CiteScore
5.20
自引率
5.00%
发文量
50
审稿时长
1 months
期刊介绍: PROTEOMICS - Clinical Applications has developed into a key source of information in the field of applying proteomics to the study of human disease and translation to the clinic. With 12 issues per year, the journal will publish papers in all relevant areas including: -basic proteomic research designed to further understand the molecular mechanisms underlying dysfunction in human disease -the results of proteomic studies dedicated to the discovery and validation of diagnostic and prognostic disease biomarkers -the use of proteomics for the discovery of novel drug targets -the application of proteomics in the drug development pipeline -the use of proteomics as a component of clinical trials.
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