Identification of ferroptotic genes and phenotypes in idiopathic nonobstructive azoospermia.

IF 2.1 4区 医学 Q3 ANDROLOGY Systems Biology in Reproductive Medicine Pub Date : 2023-12-01 Epub Date: 2023-11-20 DOI:10.1080/19396368.2023.2257352
Chen Liao, Tian-Wen Peng, Xiao-Min Li, Zhi-Cong Chen, Mu-Ye Wang, Xin Ye, Yu Lan, Xin Fu, Geng An
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Abstract

Effective treatments for nonobstructive azoospermia (NOA), which affects 1% of all men globally, are limited by undefined pathogenic mechanisms, especially in idiopathic NOA (iNOA). Here, we tried to identify the functional ferroptosis-related genes and phenotypes involved in iNOA. Differentially expressed ferroptotic genes were identified from iNOA mRNA microarray datasets by bioinformatic analyses, and these ferroptotic genes were subsequently filtered by various algorithms. Then, receiver operating characteristic (ROC) curves were generated to evaluate the diagnostic ability of the abovementioned genes for iNOA. Generally, 11 differentially expressed ferroptotic genes were downregulated, and five genes were upregulated in iNOA samples. Four genes, including DUSP1, GPX4, HSD17B11, and SLC2A8, were technically selected and determined to be potential biomarkers for iNOA. Subsequently, similar expression levels were validated at both the RNA and protein levels in the iNOA specimens. Finally, morphologic and biochemical assays were applied to define the ferroptotic phenotypes in testes. The ferroptotic features, like shrunken mitochondria with electron-dense membranes and a reduction in cristae were observed across various cell types within iNOA patients, accompanied by the overload of ferrous ions and increased lipid peroxidation production. Our findings demonstrated that these ferroptosis genes could be involved in the underlying pathogenesis mechanisms of iNOA by regulating ferroptosis and serve as potential diagnostic biomarkers. Also, the ferroptotic phenotypes were identified in iNOA patients.

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特发性非梗阻性无精子症脱铁基因和表型的鉴定。
影响全球1%男性的非梗阻性无精子症(NOA)的有效治疗受到未明确致病机制的限制,尤其是在特发性NOA(iNOA)中。在这里,我们试图鉴定iNOA中涉及的功能性脱铁相关基因和表型。通过生物信息学分析从iNOA mRNA微阵列数据集中鉴定出差异表达的脱铁基因,随后通过各种算法对这些脱铁基因进行过滤。然后,生成受试者工作特性(ROC)曲线,以评估上述基因对iNOA的诊断能力。一般来说,iNOA样本中有11个差异表达的脱铁基因下调,5个基因上调。从技术上选择了四个基因,包括DUSP1、GPX4、HSD17B11和SLC2A8,并确定它们是iNOA的潜在生物标志物。随后,在iNOA标本中,在RNA和蛋白质水平上验证了相似的表达水平。最后,应用形态学和生化分析来确定睾丸中的脱铁表型。在iNOA患者的各种细胞类型中观察到脱铁性特征,如具有电子致密膜的线粒体萎缩和嵴减少,同时伴有铁离子过载和脂质过氧化产生增加。我们的研究结果表明,这些脱铁蛋白基因可能通过调节脱铁蛋白参与iNOA的潜在发病机制,并作为潜在的诊断生物标志物。此外,在iNOA患者中发现了脱铁表型。
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来源期刊
CiteScore
4.30
自引率
4.20%
发文量
27
审稿时长
>12 weeks
期刊介绍: Systems Biology in Reproductive Medicine, SBiRM, publishes Research Articles, Communications, Applications Notes that include protocols a Clinical Corner that includes case reports, Review Articles and Hypotheses and Letters to the Editor on human and animal reproduction. The journal will highlight the use of systems approaches including genomic, cellular, proteomic, metabolomic, bioinformatic, molecular, and biochemical, to address fundamental questions in reproductive biology, reproductive medicine, and translational research. The journal publishes research involving human and animal gametes, stem cells, developmental biology and toxicology, and clinical care in reproductive medicine. Specific areas of interest to the journal include: male factor infertility and germ cell biology, reproductive technologies (gamete micro-manipulation and cryopreservation, in vitro fertilization/embryo transfer (IVF/ET) and contraception. Research that is directed towards developing new or enhanced technologies for clinical medicine or scientific research in reproduction is of significant interest to the journal.
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