Attention-based dual-path feature fusion network for automatic skin lesion segmentation.

IF 4 3区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY Biodata Mining Pub Date : 2023-10-09 DOI:10.1186/s13040-023-00345-x
Zhenxiang He, Xiaoxia Li, Yuling Chen, Nianzu Lv, Yong Cai
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Abstract

Automatic segmentation of skin lesions is a critical step in Computer Aided Diagnosis (CAD) of melanoma. However, due to the blurring of the lesion boundary, uneven color distribution, and low image contrast, resulting in poor segmentation result. Aiming at the problem of difficult segmentation of skin lesions, this paper proposes an Attention-based Dual-path Feature Fusion Network (ADFFNet) for automatic skin lesion segmentation. Firstly, in the spatial path, a Boundary Refinement (BR) module is designed for the output of low-level features to filter out irrelevant background information and retain more boundary details of the lesion area. Secondly, in the context path, a Multi-scale Feature Selection (MFS) module is constructed for high-level feature output to capture multi-scale context information and use the attention mechanism to filter out redundant semantic information. Finally, we design a Dual-path Feature Fusion (DFF) module, which uses high-level global attention information to guide the step-by-step fusion of high-level semantic features and low-level detail features, which is beneficial to restore image detail information and further improve the pixel-level segmentation accuracy of skin lesion. In the experiment, the ISIC 2018 and PH2 datasets are employed to evaluate the effectiveness of the proposed method. It achieves a performance of 0.890/ 0.925 and 0.933 /0.954 on the F1-score and SE index, respectively. Comparative analysis with state-of-the-art segmentation methods reveals that the ADFFNet algorithm exhibits superior segmentation performance.

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基于注意力的双路径特征融合网络用于皮肤损伤的自动分割。
皮肤病变的自动分割是黑色素瘤计算机辅助诊断(CAD)的关键步骤。然而,由于病变边界模糊,颜色分布不均匀,图像对比度低,导致分割效果差。针对皮肤病变分割困难的问题,提出了一种基于注意力的双路径特征融合网络(ADFNet)用于皮肤病变的自动分割。首先,在空间路径中,设计了一个边界细化(BR)模块,用于输出低级特征,以过滤掉不相关的背景信息,并保留病变区域的更多边界细节。其次,在上下文路径中,构造了一个多尺度特征选择(MFS)模块,用于高级特征输出,以捕获多尺度上下文信息,并利用注意力机制过滤掉冗余的语义信息。最后,我们设计了一个双路径特征融合(DFF)模块,该模块利用高级全局注意力信息来指导高级语义特征和低级细节特征的逐步融合,有利于恢复图像细节信息,进一步提高皮肤损伤的像素级分割精度。在实验中,使用ISIC 2018和PH2数据集来评估所提出方法的有效性。它在F1得分和SE指数上分别达到0.890/0.925和0.933/0.954。与最先进的分割方法的比较分析表明,ADFNet算法表现出优越的分割性能。
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来源期刊
Biodata Mining
Biodata Mining MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
7.90
自引率
0.00%
发文量
28
审稿时长
23 weeks
期刊介绍: BioData Mining is an open access, open peer-reviewed journal encompassing research on all aspects of data mining applied to high-dimensional biological and biomedical data, focusing on computational aspects of knowledge discovery from large-scale genetic, transcriptomic, genomic, proteomic, and metabolomic data. Topical areas include, but are not limited to: -Development, evaluation, and application of novel data mining and machine learning algorithms. -Adaptation, evaluation, and application of traditional data mining and machine learning algorithms. -Open-source software for the application of data mining and machine learning algorithms. -Design, development and integration of databases, software and web services for the storage, management, retrieval, and analysis of data from large scale studies. -Pre-processing, post-processing, modeling, and interpretation of data mining and machine learning results for biological interpretation and knowledge discovery.
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