Network analysis and molecular docking studies of quercetin as a potential treatment for prostate cancer.

In silico pharmacology Pub Date : 2023-09-19 eCollection Date: 2023-01-01 DOI:10.1007/s40203-023-00162-4
Frank Kalungi, Anthony Nsubuga, Godwin Anywar
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Abstract

Globally, the prevalence of prostate cancer is only the second to lung cancer. In Africa however, the commonest cancer among men is cancer of the prostate. The use of natural compounds from plants such as quercetin is being explored as a potential cure. Quercetin is a plant-based flavonoid that has anti-inflammatory, antioxidant and anticancer properties. Although quercetin has been extensively studied, its chemo preventive mode of action is not well-understood. The molecular targets and potential mechanisms underlying the action of quercetin against prostate cancer were identified and validated using network pharmacology and molecular docking methods. The biological targets of quercetin and targets associated with prostate cancer were obtained through database mining. Overlapping targets associated with quercetin and prostate cancer were identified and used to construct a compound-disease target (C-D) network and the targets were subjected to Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and protein-protein interaction analysis (PPI). A disease target- pathway network was constructed and then merged with C-D network to form a compound-disease_target-pathway (C-D-P) network. Hub targets were obtained from the C-D-P and PPI networks. The binding affinities between quercetin and the retrieved hub targets were identified. Pathway enrichment analysis showed that prostate cancer associated quercetin targets were mainly linked with pathways such as the cancer signaling pathways (HIF-1 and ErbB) and hepatitis B. Basing on the PPI and C-D-P network analysis STAT3, TP53, MAPK1, MAPK3 and KRAS were identified as the main targets and were subjected to molecular docking. The results showed quercetin's ability to stably bind to the key targets. In conclusion, this study showed the potential molecular targets and mode of action of quercetin in prostate cancer treatment. This can potentially inform the future use of quercetin in the treatment of prostate cancer.

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槲皮素作为癌症潜在治疗药物的网络分析和分子对接研究。
在全球范围内,癌症的患病率仅次于癌症。然而,在非洲,男性中最常见的癌症是癌症。槲皮素等植物天然化合物的使用正被探索为一种潜在的治疗方法。槲皮素是一种植物类黄酮,具有抗炎、抗氧化和抗癌特性。尽管槲皮素已被广泛研究,但其化学预防作用模式尚不清楚。利用网络药理学和分子对接方法,鉴定并验证了槲皮素抗前列腺癌症作用的分子靶点和潜在机制。通过数据库挖掘获得槲皮素的生物学靶点和与前列腺癌症相关的靶点。识别与槲皮素和前列腺癌症相关的重叠靶点,并将其用于构建化合物-二酶靶点(C-D)网络,并对靶点进行京都基因和基因组百科全书(KEGG)途径和蛋白质-蛋白质相互作用分析(PPI)。构建了疾病靶向通路网络,并将其与C-D网络合并,形成复合疾病靶向路径网络(C-D-P)。集线器目标是从C-D-P和PPI网络中获得的。鉴定了槲皮素与回收的中枢靶标之间的结合亲和力。通路富集分析表明,前列腺癌症相关的槲皮素靶点主要与癌症信号通路(HIF-1和ErbB)和乙型肝炎等通路相关。通过PPI和C-D-P网络分析,确定STAT3、TP53、MAPK1、MAPK3和KRAS为主要靶点,并进行分子对接。结果表明槲皮素具有稳定结合关键靶标的能力。总之,本研究显示了槲皮素在前列腺癌症治疗中的潜在分子靶点和作用模式。这可能为槲皮素在治疗癌症中的未来应用提供潜在的信息。
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