Exciton delocalization in a fully synthetic DNA-templated bacteriochlorin dimer†

IF 2.9 3区 化学 Q3 CHEMISTRY, PHYSICAL Physical Chemistry Chemical Physics Pub Date : 2023-10-16 DOI:10.1039/D3CP01634J
Olga A. Mass, Devan R. Watt, Lance K. Patten, Ryan D. Pensack, Jeunghoon Lee, Daniel B. Turner, Bernard Yurke and William B. Knowlton
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Abstract

A bacteriochlorophyll a (Bchla) dimer is a basic functional unit in the LH1 and LH2 photosynthetic pigment–protein antenna complexes of purple bacteria, where an ordered, close arrangement of Bchla pigments—secured by noncovalent bonding to a protein template—enables exciton delocalization at room temperature. Stable and tunable synthetic analogs of this key photosynthetic subunit could lead to facile engineering of exciton-based systems such as in artificial photosynthesis, organic optoelectronics, and molecular quantum computing. Here, using a combination of synthesis and theory, we demonstrate that exciton delocalization can be achieved in a dimer of a synthetic bacteriochlorin (BC) featuring stability, high structural modularity, and spectral properties advantageous for exciton-based devices. The BC dimer was covalently templated by DNA, a stable and highly programmable scaffold. To achieve exciton delocalization in the absence of pigment–protein interactions critical for the Bchla dimer, we relied on the strong transition dipole moment in BC enabled by two auxochromes along the Qy transition, and omitting the central metal and isocyclic ring. The spectral properties of the synthetic “free” BC closely resembled those of Bchla in an organic solvent. Applying spectroscopic modeling, the exciton delocalization in the DNA-templated BC dimer was evaluated by extracting the excitonic hopping parameter, J to be 214 cm−1 (26.6 meV). For comparison, the same method applied to the natural protein-templated Bchla dimer yielded J of 286 cm−1 (35.5 meV). The smaller value of J in the BC dimer likely arose from the partial bacteriochlorin intercalation and the difference in medium effect between DNA and protein.

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在完全合成的DNA模板化的细菌氯蛋白二聚体中的激子离域。
细菌叶绿素A(Bchla)二聚体是紫色细菌LH1和LH2光合色素-蛋白质-天线复合物中的基本功能单元,其中通过与蛋白质模板的非共价键固定的Bchla色素的有序、紧密排列能够在室温下实现激子离域。这个关键的光合亚基的稳定和可调的合成类似物可以导致基于激子的系统的简单工程,如人工光合作用、有机光电子和分子量子计算。在这里,使用合成和理论的结合,我们证明了激子离域可以在合成菌绿蛋白(BC)的二聚体中实现,其具有稳定性、高结构模块性和对基于激子的器件有利的光谱特性。BC二聚体由DNA共价模板化,DNA是一种稳定且高度可编程的支架。为了在没有对Bchla二聚体至关重要的色素-蛋白质相互作用的情况下实现激子离域,我们依赖于BC中的强跃迁偶极矩,该矩由沿着Qy跃迁的两个auxochrome实现,并且省略了中心金属和等环。合成的“游离”BC的光谱性质与Bchla在有机溶剂中的光谱性质非常相似。应用光谱建模,通过提取激子跳跃参数J为214cm-1(26.6meV)来评估DNA模板化的BC二聚体中的激子离域。为了进行比较,将相同的方法应用于天然蛋白质模板化的Bchla二聚体,得到286cm-1(35.5meV)的J。BC二聚体中J的较小值可能是由于部分菌氯素嵌入以及DNA和蛋白质之间的介质效应差异引起的。
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来源期刊
Physical Chemistry Chemical Physics
Physical Chemistry Chemical Physics 化学-物理:原子、分子和化学物理
CiteScore
5.50
自引率
9.10%
发文量
2675
审稿时长
2.0 months
期刊介绍: Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.
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