Biological and Molecular Components for Genetically Engineering Biosensors in Plants.

Q2 Agricultural and Biological Sciences 生物设计研究(英文) Pub Date : 2022-11-09 eCollection Date: 2022-01-01 DOI:10.34133/2022/9863496
Yang Liu, Guoliang Yuan, Md Mahmudul Hassan, Paul E Abraham, Julie C Mitchell, Daniel Jacobson, Gerald A Tuskan, Arjun Khakhar, June Medford, Cheng Zhao, Chang-Jun Liu, Carrie A Eckert, Mitchel J Doktycz, Timothy J Tschaplinski, Xiaohan Yang
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Abstract

Plants adapt to their changing environments by sensing and responding to physical, biological, and chemical stimuli. Due to their sessile lifestyles, plants experience a vast array of external stimuli and selectively perceive and respond to specific signals. By repurposing the logic circuitry and biological and molecular components used by plants in nature, genetically encoded plant-based biosensors (GEPBs) have been developed by directing signal recognition mechanisms into carefully assembled outcomes that are easily detected. GEPBs allow for in vivo monitoring of biological processes in plants to facilitate basic studies of plant growth and development. GEPBs are also useful for environmental monitoring, plant abiotic and biotic stress management, and accelerating design-build-test-learn cycles of plant bioengineering. With the advent of synthetic biology, biological and molecular components derived from alternate natural organisms (e.g., microbes) and/or de novo parts have been used to build GEPBs. In this review, we summarize the framework for engineering different types of GEPBs. We then highlight representative validated biological components for building plant-based biosensors, along with various applications of plant-based biosensors in basic and applied plant science research. Finally, we discuss challenges and strategies for the identification and design of biological components for plant-based biosensors.

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植物基因工程生物传感器的生物和分子成分。
植物通过感知和响应物理、生物和化学刺激来适应不断变化的环境。由于其固着的生活方式,植物会经历大量的外部刺激,并选择性地感知和响应特定的信号。通过重新利用自然界中植物使用的逻辑电路、生物和分子组件,通过将信号识别机制引导到易于检测的精心组装的结果中,开发出了基因编码的植物生物传感器(GEPBs)。GEPB允许对植物的生物过程进行体内监测,以促进植物生长发育的基础研究。GEPB还可用于环境监测、植物非生物和生物胁迫管理,以及加速植物生物工程的设计-建造-测试-学习周期。随着合成生物学的出现,衍生自替代自然生物(如微生物)和/或从头部分的生物和分子成分已被用于构建GEPB。在这篇综述中,我们总结了设计不同类型GEPB的框架。然后,我们重点介绍了用于构建植物生物传感器的代表性验证生物组件,以及植物生物传感器在基础和应用植物科学研究中的各种应用。最后,我们讨论了植物生物传感器生物成分识别和设计的挑战和策略。
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CiteScore
3.90
自引率
0.00%
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0
审稿时长
12 weeks
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