Effect of detachment of motor protein from track on its transport

IF 1.8 4区 生物学 Q3 BIOPHYSICS Journal of Biological Physics Pub Date : 2022-10-03 DOI:10.1007/s10867-022-09613-z
Mohd Suhail Rizvi
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Abstract

The transportation of the cargoes in biological cells is primarily driven by the motor proteins on filamentous protein tracks. The stochastic nature of the motion of motor protein often leads to its spontaneous detachment from the track. We formulate a mathematical model to study the effect of the detachment of motor protein on its track bound transport. We calculate two quantities: the distance traveled by the motor protein in given time, and the average time taken by a single motor protein to reach a target distance. Expectedly, both of these quantities decrease with the increasing detachment rate if the motor velocity is kept fixed. However, the existing experimental data suggest that a change in the detachment rate also affects the velocity of the motor protein. This relation between motor protein speed and its detachment rate results in a non-monotonic dependence on the distance traveled in fixed time and transport rate to a fixed distance. Therefore, we demonstrate that optimal motor speeds can be identified for the time and distance controlled conditions.

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运动蛋白脱离轨道对其运输的影响
生物细胞中货物的运输主要由丝状蛋白轨道上的运动蛋白驱动。运动蛋白运动的随机性常常导致其自发脱离运动轨迹。我们建立了一个数学模型来研究运动蛋白脱离对其轨道结合运输的影响。我们计算了两个量:运动蛋白在给定时间内移动的距离,以及单个运动蛋白到达目标距离所需的平均时间。可以预见的是,如果电机速度保持固定,这两个量都随着分离率的增加而减少。然而,现有的实验数据表明,分离速率的变化也会影响运动蛋白的速度。运动蛋白速度与其分离率之间的这种关系导致运动蛋白在固定时间内移动的距离和到固定距离的运输速率非单调依赖。因此,我们证明了可以在时间和距离控制条件下确定最佳电机速度。
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来源期刊
Journal of Biological Physics
Journal of Biological Physics 生物-生物物理
CiteScore
3.00
自引率
5.60%
发文量
20
审稿时长
>12 weeks
期刊介绍: Many physicists are turning their attention to domains that were not traditionally part of physics and are applying the sophisticated tools of theoretical, computational and experimental physics to investigate biological processes, systems and materials. The Journal of Biological Physics provides a medium where this growing community of scientists can publish its results and discuss its aims and methods. It welcomes papers which use the tools of physics in an innovative way to study biological problems, as well as research aimed at providing a better understanding of the physical principles underlying biological processes.
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