A Simple and Cost-Effective Protocol for DNA Isolation from Herbarium Specimens

IF 0.6 4区 生物学 Q4 PLANT SCIENCES Annales Botanici Fennici Pub Date : 2022-09-15 DOI:10.5735/085.059.0137
Y. Kurt, A. Parmaksız, Ö. Kaya, Dilara Ulusal, Cahit Çeçen
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Abstract

We developed a new CTAB-based seven-step DNA extraction protocol to isolate DNA from herbarium specimens. DNA was extracted from five species belonging to five genera from four families of angiosperms. The spectrophotometric measurement of double-stranded DNA demonstrated DNA of sufficient quality and quantity for PCR analysis. DNA was tested with universal primers and amplification success was 95%. The protocol is applicable to different taxonomic groups of herbarium specimens, fresh and silica-dried samples, and requires only common laboratory consumables and equipment. It is possible to extract 30 samples in less than two hours and more than 120 samples in a working day. The cost of consumables per sample is less than in many traditional protocols and commercially available kits.
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一种简单而经济的植物标本DNA分离方案
我们开发了一种新的基于CTAB的七步DNA提取方案,从植物标本中分离DNA。从被子植物四科五属五种植物中提取DNA。双链DNA的分光光度测定表明DNA具有足够的质量和数量用于PCR分析。用通用引物检测DNA,扩增成功率为95%。该方案适用于植物标本馆标本、新鲜样品和二氧化硅干燥样品的不同分类组,只需要常见的实验室耗材和设备。可以在不到两个小时内提取30个样本,在一个工作日内提取120多个样本。每个样本的耗材成本低于许多传统方案和商用试剂盒。
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来源期刊
Annales Botanici Fennici
Annales Botanici Fennici 生物-植物科学
CiteScore
1.30
自引率
14.30%
发文量
38
审稿时长
6-12 weeks
期刊介绍: The journal publishes original, previously unpublished papers on plant and fungal: • systematics, evolution, phylogeography, taxonomy and nomenclature, • population biology and genetics, • physiology and molecular biology, • terrestrial and aquatic ecology (including effects of climate change), • ecology and reproduction of invasive species as well as their effects on native populations, • phytogeography and paleoecology.
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