Are wing contours good classifiers for automatic identification in Odonata? A view from the Targeted Odonata Wing Digitization (TOWD) project

IF 1 4区 农林科学 Q3 ENTOMOLOGY International Journal of Odonatology Pub Date : 2022-12-08 DOI:10.48156/1388.2022.1917184
Mayra A. Sáenz Oviedo, William R. Kuhn, Martin A. Rondon Sepulveda, J. Abbott, J. Ware, Melissa Sánchez-Herrera
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Abstract

In recent decades, a lack of available knowledge about the magnitude, identity and distribution of biodiversity has given way to a taxonomic impediment where species are not being described as fast as the rate of extinction. Using Machine Learning methods based on seven different algorithms (LR, CART, KNN, GNB, LDA, SVM and RFC) we have created an automatic identification approach for odonate genera, through images of wing contours. The training population is composed of the collected specimens that have been digitized in the framework of the NSF funded Odomatic and TOWD projects. Each contour was pre-processed, and 80 coefficients were extracted for each specimen. These form a database with 4656 rows and 80 columns, which was divided into 70% for training and 30% for testing the classifiers. The classifier with the best performance was a Linear Discriminant Analysis (LDA), which discriminated the highest number of classes (100) with an accuracy value of 0.7337, precision of 0.75, recall of 0.73 and a F1 score of 0.73. Additionally, two main confusion groups are reported, among genera within the suborders of Anisoptera and Zygoptera. These confusion groups suggest a need to include other morphological characters that complement the wing information used for the classification of these groups thereby improving accuracy of classification. Likewise, the findings of this work open the door to the application of machine learning methods for the identification of species in Odonata and in insects more broadly which would potentially reduce the impact of the taxonomic impediment.
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翅膀轮廓是好的分类器自动识别在Odonata?从目标翼数字化(TOWD)项目的观点
近几十年来,由于缺乏对生物多样性的规模、特征和分布的现有知识,导致了一种分类障碍,即物种的描述速度赶不上灭绝的速度。利用基于七种不同算法(LR、CART、KNN、GNB、LDA、SVM和RFC)的机器学习方法,我们通过机翼轮廓图像创建了一种用于器官属的自动识别方法。训练人口由收集的标本组成,这些标本在美国国家科学基金会资助的Odomatic和TOWD项目框架下进行了数字化。对每个轮廓进行预处理,并为每个标本提取80个系数。这些组成了一个有4656行和80列的数据库,其中70%用于训练,30%用于测试分类器。表现最好的分类器是线性判别分析(Linear Discriminant Analysis, LDA),其判别类数最多(100个),准确率为0.7337,精密度为0.75,召回率为0.73,F1分数为0.73。此外,在异翅目和钩翅目亚目的属中,还报道了两个主要的混淆群。这些混淆群表明需要包括其他形态特征,以补充用于分类这些群的翅膀信息,从而提高分类的准确性。同样,这项工作的发现为机器学习方法的应用打开了大门,用于更广泛地识别蛇目动物和昆虫的物种,这可能会减少分类障碍的影响。
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来源期刊
CiteScore
2.30
自引率
0.00%
发文量
15
审稿时长
>12 weeks
期刊介绍: International Journal of Odonatology (IJO) is aimed at providing a publication outlet for the growing number of students of Odonata. It will address subjects such as the ecology, ethology, physiology, genetics, taxonomy, phylogeny and geographic distribution of species. Reviews will be by invitation, but authors who plan to write a review on a subject of interest to the journal are encouraged to contact the editor.
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