SIMULATION MODELING OF A HIGH-THROUGHPUT OYSTER CRYOPRESERVATION PATHWAY.

IF 1.3 4区 农林科学 Q3 FISHERIES Journal of Shellfish Research Pub Date : 2022-08-01 Epub Date: 2022-10-24 DOI:10.2983/035.041.0206
Sarah Bodenstein, Isabelina Nahmens, Terrence R Tiersch
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引用次数: 0

Abstract

The genetic resources of oysters in Louisiana and the Gulf of Mexico are threatened due to high unexplained oyster mortality. Germplasm repositories are collections of cryopreserved genetic material stored alongside associated information that are used to protect genetics resources and facilitate breeding programs in agricultural industries. Therefore, there is great need for oyster repositories. Development of repositories has been slow despite research on high-throughput cryopreservation protocols because of logistical complexities. The goal of this study was to begin to address the gap between cryopreservation research and repository development in oyster aquaculture by modeling a cryopreservation protocol to understand and improve the process. The steps of a high-throughput cryopreservation protocol were defined and mapped in a process flow diagram. A simulation model was created using time study data, and key bottlenecks in the process were identified. Finally, model variations using alternate types of devices (tools or equipment) were created to address the identified bottlenecks. The model was found to accurately simulate the cryopreservation process. Parameters such as number of straws frozen per oyster, batch size, and number of operators significantly affected how the model performed and device choices produced substantial improvements. Simulation modeling has the potential to inform how cryopreservation pathways and repository systems in aquatic species should be structured and operated. There is ample opportunity for future work such as analyzing the impacts of production scale on cryopreservation processes.

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高通量牡蛎低温保存途径的仿真建模
路易斯安那州和墨西哥湾牡蛎的遗传资源正受到无法解释的高死亡率的威胁。种质资源库是冷冻保存的遗传物质和相关信息的集合,用于保护遗传资源和促进农业育种计划。因此,牡蛎储存库的需求很大。尽管研究了高通量低温保存协议,但由于物流的复杂性,储存库的发展一直很缓慢。本研究的目的是通过建立冷冻保存协议来理解和改进冷冻保存过程,从而开始解决冷冻保存研究与牡蛎养殖库开发之间的差距。定义了高通量低温保存协议的步骤,并将其映射到工艺流程图中。利用时间研究数据建立了仿真模型,并确定了过程中的关键瓶颈。最后,使用替代类型的设备(工具或设备)创建模型变体,以解决已确定的瓶颈。结果表明,该模型能较准确地模拟低温贮藏过程。每个牡蛎冷冻的吸管数量、批量大小和操作人员数量等参数显著影响模型的性能,设备的选择产生了实质性的改进。模拟建模有可能告知水生物种的低温保存途径和储存库系统应该如何构建和操作。未来的工作有充分的机会,如分析生产规模对低温保存过程的影响。
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来源期刊
Journal of Shellfish Research
Journal of Shellfish Research 生物-海洋与淡水生物学
CiteScore
2.30
自引率
0.00%
发文量
40
审稿时长
6 months
期刊介绍: Original articles dealing with all aspects of shellfish research will be considered for publication. Manuscripts will be judged by the editors or other competent reviewers, or both, on the basis of originality, content, merit, clarity of presentation, and interpretations.
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