Retrospective rationalization of disparities between the concentration dependence of diffusion coefficients obtained by boundary spreading and dynamic light scattering

IF 2.2 4区 生物学 Q3 BIOPHYSICS European Biophysics Journal Pub Date : 2023-07-07 DOI:10.1007/s00249-023-01664-x
Donald J. Winzor, Vlad Dinu, David J. Scott, Stephen E. Harding
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引用次数: 1

Abstract

This study establishes the existence of substantial agreement between published results from traditional boundary spreading measurements (including synthetic boundary measurements in the analytical ultracenrifuge) on two globular proteins (bovine serum albumin, ovalbumin) and the concentration dependence of diffusion coefficient predicted for experiments conducted under the operative thermodynamic constraints of constant temperature and solvent chemical potential. Although slight negative concentration dependence of the translational diffusion coefficient is the experimentally observed as well as theoretically predicted, the extent of the concentration dependence is within the limits of experimental uncertainty inherent in diffusion coefficient measurement. Attention is then directed toward the ionic strength dependence of the concentration dependence coefficient (\({k}_{D}\)) describing diffusion coefficients obtained by dynamic light scattering, where, in principle, the operative thermodynamic constraints of constant temperature and pressure preclude consideration of results in terms of single-solute theory. Nevertheless, good agreement between predicted and published experimental ionic strength dependencies of \({k}_{D}\) for lysozyme and an immunoglobulin is observed by a minor adaptation of the theoretical treatment to accommodate the fact that thermodynamic activity is monitored on the molal concentration scale because of the constraint of constant pressure that pertains in dynamic light scattering experiments.

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由边界扩散和动态光散射得到的扩散系数的浓度依赖性差异的回顾性合理化
本研究建立了两种球形蛋白(牛血清白蛋白和卵白蛋白)的传统边界扩展测量(包括在分析型超离心机中合成的边界测量)的已发表结果与在恒温和溶剂化学势的有效热力学约束下进行的实验所预测的扩散系数的浓度依赖性之间存在实质性的一致性。虽然平动扩散系数的轻微负浓度依赖是实验观察到的,也是理论预测的,但浓度依赖的程度在扩散系数测量固有的实验不确定度的范围内。然后将注意力转向描述由动态光散射获得的扩散系数的浓度依赖系数(\({k}_{D}\))的离子强度依赖关系,其中,原则上,恒定温度和压力的有效热力学约束排除了考虑单溶质理论的结果。尽管如此,通过对理论处理进行轻微调整,观察到溶菌酶和免疫球蛋白的预测和发表的实验离子强度依赖关系\({k}_{D}\)之间的良好一致性,以适应在摩尔浓度尺度上监测热力学活性的事实,因为动态光散射实验中存在恒压约束。
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来源期刊
European Biophysics Journal
European Biophysics Journal 生物-生物物理
CiteScore
4.30
自引率
0.00%
发文量
43
审稿时长
6-12 weeks
期刊介绍: The journal publishes papers in the field of biophysics, which is defined as the study of biological phenomena by using physical methods and concepts. Original papers, reviews and Biophysics letters are published. The primary goal of this journal is to advance the understanding of biological structure and function by application of the principles of physical science, and by presenting the work in a biophysical context. Papers employing a distinctively biophysical approach at all levels of biological organisation will be considered, as will both experimental and theoretical studies. The criteria for acceptance are scientific content, originality and relevance to biological systems of current interest and importance. Principal areas of interest include: - Structure and dynamics of biological macromolecules - Membrane biophysics and ion channels - Cell biophysics and organisation - Macromolecular assemblies - Biophysical methods and instrumentation - Advanced microscopics - System dynamics.
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