Synthesis, Structure, Hirshfeld Surface Analysis, Non-Covalent Interaction, and In Silico Studies of 4-Hydroxy-1-[(4-Nitrophenyl)Sulfonyl]Pyrrolidine-2-Carboxyllic Acid

IF 0.4 4区 化学 Q4 CRYSTALLOGRAPHY Journal of Chemical Crystallography Pub Date : 2023-03-09 DOI:10.1007/s10870-023-00978-0
David Izuchukwu Ugwu, Florence Uchenna Eze, Chigozie Julius Ezeorah, Lydia Rhyman, Ponnadurai Ramasami, Groutso Tania, Cosmas Chinweike Eze, Chiamaka Peace Uzoewulu, Blessing Chinweotito Ogboo, Obinna Chibueze Okpareke
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引用次数: 1

Abstract

The new compound 4-hydroxy-1-[(4-nitrophenyl)sulfonyl]pyrrolidine-2-carboxyllic acid was obtained by the reaction of 4-hydroxyproline with 4-nitrobenzenesulfonyl chloride. The compound was characterized using single crystal X-ray diffraction studies. Spectroscopic methods including NMR, FTIR, ES-MS, and UV were employed for further structural analysis of the synthesized compound. The title compound was found to have crystallized in an orthorhombic crystal system with space group P212121. The S1-N1 bond length of 1.628 (2) Å was a strong indication of the formation of the title compound. The absence of characteristic downfield 1H NMR peak of pyrrolidine ring and the presence of S–N stretching vibration at 857.82 cm−1 on the FTIR are strong indications for the formation of the sulfonamide. The experimental study was complemented with computations at the B3LYP/6-311G +  + (d,p) level of theory to gain more understanding of interactions in the compound at the molecular level. Noncovalent interaction, Hirsfeld surface analysis and interaction energy calculations were employed in the analysis of the supramolecular architecture of the compound. Predicted ADMET parameters, awarded suitable bioavailability credentials, while the molecular docking study indicated that the compound enchants promising inhibition prospects against dihydropteroate synthase, DNA topoisomerase, and SARS-CoV-2 spike.

Graphical Abstract

Herein we present the solid state structure, noncovalent interaction and spectroscopic analysis of a prospective bioactive compound 4-hydroxy-1-[(4-nitrophenyl)sulphonyl]pyrrolidine-2-carboxyllic acid.

Abstract Image

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4-羟基-1-[(4-硝基苯基)磺酰基]吡咯烷-2-羧酸的合成、结构、Hirshfeld表面分析、非共价相互作用和硅研究
以4-羟基脯氨酸和4-硝基苯磺酰氯为原料,合成了新的化合物4-羟基-1-[(4-硝基苯)磺酰]吡咯烷-2-羧酸。用单晶x射线衍射对该化合物进行了表征。采用NMR、FTIR、ES-MS、UV等光谱分析方法对合成的化合物进行了进一步的结构分析。发现标题化合物在空间群为P212121的正交晶系中结晶。S1-N1键长为1.628 (2)Å,是标题化合物形成的有力标志。吡咯烷环下1H核磁共振特征峰的缺失和FTIR在857.82 cm−1处的S-N拉伸振动是该磺胺形成的有力证据。实验研究与B3LYP/6- 311g++ (d,p)水平的理论计算相辅相成,以在分子水平上对化合物的相互作用有更多的了解。采用非共价相互作用、Hirsfeld表面分析和相互作用能计算对化合物的超分子结构进行分析。预测了ADMET参数,获得了合适的生物利用度证书,而分子对接研究表明该化合物对二氢蝶呤合成酶、DNA拓扑异构酶和SARS-CoV-2刺突具有良好的抑制前景。本文报道了一种前景生物活性化合物4-羟基-1-[(4-硝基苯基)磺基]吡咯烷-2-羧酸的固态结构、非共价相互作用和光谱分析。
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来源期刊
CiteScore
1.50
自引率
12.50%
发文量
56
审稿时长
6.3 months
期刊介绍: Journal of Chemical Crystallography is an international and interdisciplinary publication dedicated to the rapid dissemination of research results in the general areas of crystallography and spectroscopy. Timely research reports detail topics in crystal chemistry and physics and their relation to problems of molecular structure; structural studies of solids, liquids, gases, and solutions involving spectroscopic, spectrometric, X-ray, and electron and neutron diffraction; and theoretical studies.
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