Emerging role of a systems biology approach to elucidate factors of reduced penetrance: transcriptional changes in THAP1-linked dystonia as an example.

IF 0.8 4区 生物学 Q4 GENETICS & HEREDITY Medizinische Genetik Pub Date : 2022-08-12 eCollection Date: 2022-06-01 DOI:10.1515/medgen-2022-2126
Sokhna Haissatou Diaw, Fabian Ott, Alexander Münchau, Katja Lohmann, Hauke Busch
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Abstract

Pathogenic variants in THAP1 can cause dystonia with a penetrance of about 50 %. The underlying mechanisms are unknown and can be considered as means of endogenous disease protection. Since THAP1 encodes a transcription factor, drivers of this variability putatively act at the transcriptome level. Several transcriptome studies tried to elucidate THAP1 function in diverse cellular and mouse models, including mutation carrier-derived cells and iPSC-derived neurons, unveiling various differentially expressed genes and affected pathways. These include nervous system development, dopamine signalling, myelination, or cell-cell adhesion. A network diffusion analysis revealed mRNA splicing, mitochondria, DNA repair, and metabolism as significant pathways that may represent potential targets for therapeutic interventions.

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系统生物学方法在阐明外显率降低因素中的新作用:以thap1相关肌张力障碍的转录变化为例
摘要THAP1的致病性变异可导致肌张力障碍,外显率约为50 %. 其潜在机制尚不清楚,可被视为内源性疾病保护的手段。由于THAP1编码一种转录因子,这种变异性的驱动因素可能在转录组水平上起作用。几项转录组研究试图阐明THAP1在不同细胞和小鼠模型中的功能,包括突变载体衍生的细胞和iPSC衍生的神经元,揭示了各种差异表达的基因和受影响的途径。这些包括神经系统发育、多巴胺信号传导、髓鞘形成或细胞间粘附。网络扩散分析显示,信使核糖核酸剪接、线粒体、DNA修复和代谢是重要的途径,可能代表治疗干预的潜在靶点。
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来源期刊
Medizinische Genetik
Medizinische Genetik Medicine-Genetics (clinical)
CiteScore
1.40
自引率
9.10%
发文量
48
审稿时长
>12 weeks
期刊介绍: medizinischegenetik is a scientific journal that is owned and published by the German Society of Human Genetics e.V. since 1989. The journal was founded by Prof. Jan Murken, München. Self-published until 2006, from 2007-2019 published at Springer Verlag and since 2020 at De Gruyter. medizinischegenetik serves education and training among colleagues, the interdisciplinary exchange of knowledge in all areas of human genetics in clinics, practice, research and teaching. Each issue of the quarterly journal deals with a focus that provides a comprehensive overview of current developments in specific clinical pictures, technical developments and therapeutic approaches. All reviews are written in English language. The journal thus creates a platform for the international exchange of knowledge and increased awareness of German research activities in the scientific community. In addition, medizinischegenetik contains information on activities in its own subject in the German-language section. This includes conference reports, association announcements, personnel matters, statements and guidelines. With health policy questions, historical retrospectives and comments on current developments, the profession takes a stand on human genetic issues in Germany, Austria and Switzerland.
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