Morphological and Genotypic Characterization Of Different Lotus (Nelumbo Nucifera Gaertn.) Samples Available in Bangladesh

IF 0.6 4区 生物学 Q4 PLANT SCIENCES Bangladesh Journal of Plant Taxonomy Pub Date : 2022-06-26 DOI:10.3329/bjpt.v29i1.60450
S. Roy, Mahbuba Jannat, N. Tabassum, M. Islam
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Abstract

Asian lotus (Nelumbo nucifera Gaertn.), commonly known as sacred lotus is a basal eudicot. It has been grown and cultivated as food, medicine and for cultural, and religious activities. In the current study, samples were collected from six different locations to evaluate the variation among different lotus germplasm based on external morphological characteristics, as well as, to study the genetic variation and the molecular characterization. Analysis of variance showed a higher level of variations among the germplasm for all the morphological features. Based on the morphological features, a dendrogram was constructed to assess the linkage among the germplasm. The yellow lotus of Cumilla was considered superior among the germplasm studied. To assess the genetic diversity and the correct identification of lotus germplasm, molecular method “Barcoding” was performed. To achieve the goal, two plastidial regions: rpoB and rpoC1 were employed. The germplasm showing successful PCR were subjected to sequence analysis of their barcode genes. All the selected barcode genes showed successful identification of all the germplasm as N. nucifera in multilocus identification based on their sequences except for the germplasm of Rajshahi and also confirmed the yellowish lotus of Cumilla considered as a new cultivar N. nucifera ‘Gomoti’, newly found in Bangladesh. Genetic sequences obtained in the context of DNA barcoding had also been used to create a phylogenetic tree in which the germplasm were clustered into five main clades. The current study was successful in establishing an efficient protocol for the correct identification of lotus germplasm and was capable of establishing an elite gene source. Moreover, future studies are warranted to see the identifying capability and diverging power of the barcodes. Bangladesh J. Plant Taxon. 29(1): 85-95, 2022 (June)
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不同莲(Nelumbo Nucifera Gaertn.)形态及基因型特征孟加拉提供样本
亚洲莲(莲花),俗称圣莲,是一种基生莲花。人们种植和栽培它作为食物、药物以及文化和宗教活动。本研究从6个不同地点采集荷花种质,从外部形态特征上评价荷花种质间的差异,并对荷花种质的遗传变异和分子特征进行研究。方差分析表明,各种质间的形态特征差异较大。基于形态特征,构建了树图,评价了种质间的连锁关系。在所研究的种质中,黄荷被认为是最优的。为了评估荷花种质资源的遗传多样性和正确鉴定荷花种质资源,采用了分子“条形码”方法。为了实现这一目标,我们使用了两个质体区域:rpoB和rpoC1。对PCR成功的种质进行条形码基因序列分析。所选条形码基因在多位点鉴定中除Rajshahi种质外均成功鉴定为N. nucifera,并确认Cumilla黄莲花为孟加拉国新发现的新品种N. nucifera ' Gomoti '。在DNA条形码的背景下获得的基因序列也被用来创建一个系统发育树,其中种质资源被聚集成五个主要分支。本研究成功地建立了正确鉴定荷花种质资源的有效方案,并能够建立一个精英基因源。此外,还需要进一步研究条形码的识别能力和发散能力。植物分类单元。29(1):85- 95,2022 (6)
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来源期刊
CiteScore
0.42
自引率
44.40%
发文量
12
审稿时长
6 months
期刊介绍: Bangladesh is a humid, subtropical country favouring luxuriant growth of microorganisms, fungi and plants from algae to angiosperms with rich diversity. She has the largest mangrove forest of the world in addition to diverse hilly and wetland habitats. More than a century back, foreign explorers endeavoured several floral expeditions, but little was done for non-vasculars and pteridophytes. In recent times, Bangladesh National Herbarium has been carrying out taxonomic research in Bangladesh along with few other national institutes (e.g. Department of Botany of public universities and Bangladesh Forest Research Institute).
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