Associative Genetic Diversity of Sarcocystis levinei Isolates across the Globe

V. Sudan, D. Shanker, S. Paliwal, Rahul Kumar
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Abstract

Bubaline sarcocystosis, caused by Sarcocystis levinei, is worldwide in distribution. Yet, very limited reports are available across the globe on the phylogenetic aspects of this particular Sarcocystis spp. Virtually no literature is available on its molecular aspects from India. Thus, the present study was designed to phylogenetically characterize the various isolates of S. levinei based on 18S rRNA and cox 1 mitochondrial genes. A total of 11 isolates of S. levinei from Northern India were characterized for 18S rRNA (MG957189-MG957199) and cox 1 (MH255771-MH255781) genes. PCR products were cloned, sequenced, and compared with other sequences across the world. A phylogenetic tree was constructed based on the maximum likelihood (ML) method. Phylogenetic analysis placed S. levinei and S. cruzi into two monophyletic sister groups. An appreciable amount of genetic variability was noticed between various S. levinei sequences for both the gene loci. A total of three haplotypes were noticed for each gene. The generated sequences showed 99.8–100.0% and 99.7–100.0% nucleotide homologies within themselves with regard to the 18S rRNA and cox 1 genes, respectively. Few of the studied sequences showed marked similarity and closeness with the Egyptian sequences than their Indian counterparts. This is the first report of molecular characterization and sequence phylogenetic study of S. levinei from India.
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全球levinei肉孢子虫分离株的关联遗传多样性
由利氏肌囊菌引起的丁巴碱性肌囊病在世界范围内广泛分布。然而,在全球范围内,关于这种特殊的肉囊菌的系统发育方面的报道非常有限,几乎没有来自印度的关于其分子方面的文献。因此,本研究旨在基于18S rRNA和cox 1线粒体基因对不同分离株进行系统发育表征。从印度北部分离的11株S. levinei分离株中鉴定出18S rRNA (mg957189 ~ mg957199)和cox 1 (mh255771 ~ mh255781)基因。对PCR产物进行克隆、测序,并与世界其他序列进行比较。基于最大似然(ML)方法构建了系统发育树。系统发育分析表明,葡萄球菌和克氏葡萄球菌属于两个单系姐妹类群。在这两个基因座的不同序列之间,发现了相当数量的遗传变异。每个基因共有三个单倍型。所生成的序列与18S rRNA和cox 1基因的核苷酸同源性分别为99.8-100.0%和99.7-100.0%。很少有研究序列显示出明显的相似性和接近与埃及序列比他们的印度同行。本文首次报道了产自印度的葡萄球菌的分子特征和序列系统发育研究。
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