Accessing and utilizing clinical and genomic data from an electronic health record data warehouse.

Translational medicine communications Pub Date : 2023-01-01 Epub Date: 2023-03-02 DOI:10.1186/s41231-023-00140-0
Cosby G Arnold, Brandon Sonn, Frederick J Meyers, Alexis Vest, Richie Puls, Estelle Zirkler, Michelle Edelmann, Ian M Brooks, Andrew A Monte
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Abstract

Electronic health records (EHRs) and linked biobanks have tremendous potential to advance biomedical research and ultimately improve the health of future generations. Repurposing EHR data for research is not without challenges, however. In this paper, we describe the processes and considerations necessary to successfully access and utilize a data warehouse for research. Although imperfect, data warehouses are a powerful tool for harnessing a large amount of data to phenotype disease. They will have increasing relevance and applications in clinical research with growing sophistication in processes for EHR data abstraction, biobank integration, and cross-institutional linkage.

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访问和利用来自电子健康记录数据仓库的临床和基因组数据
电子健康记录(EHR)和链接的生物库在推动生物医学研究和最终改善后代健康方面具有巨大的潜力。然而,将电子病历数据重新用于研究并非没有挑战。在本文中,我们将介绍成功访问和利用数据仓库进行研究的必要过程和注意事项。尽管数据仓库还不完善,但它是利用大量数据对疾病进行表型的有力工具。随着电子病历(EHR)数据抽取、生物库整合和跨机构链接流程的日益成熟,数据仓库在临床研究中的相关性和应用也将日益增加。
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