Effects of inter-radical interactions and scavenging radicals on magnetosensitivity: spin dynamics simulations of proposed radical pairs

IF 2.2 4区 生物学 Q3 BIOPHYSICS European Biophysics Journal Pub Date : 2023-02-16 DOI:10.1007/s00249-023-01630-7
Gongyi Hong, Ruth Pachter
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引用次数: 1

Abstract

Although the magnetosensitivity to weak magnetic fields, such as the geomagnetic field, which was exhibited by radical pairs that are potentially responsible for avian navigation, has been previously investigated by spin dynamics simulations, understanding this behavior for proposed radical pairs in other species is limited. These include, for example, radical pairs formed in the single-cell green alga Chlamydomonas reinhardtii (CraCRY) and in Columba livia (ClCRY4). In addition, the radical pair of FADH with the one-electron reduced cyclobutane thymine dimer that was shown to be sensitive to weak magnetic fields has been of interest. In this work, we investigated the directional magnetosensitivity of these radical pairs to a weak magnetic field by spin dynamics simulations. We find significant reduction in the magnetosensitivity by inclusion of dipolar and exchange interactions, which can be mitigated by a scavenging radical, as demonstrated for the [FAD•− TyrD] radical pair in CraCRY, but not for the [FADH T□T•−] radical pair because of the large exchange coupling. The directional magnetosensitivity of the ClCRY4 [FAD•− TyrE] radical pair can survive this adverse effect even without the scavenging reaction, possibly motivating further experimental exploration.

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自由基间相互作用和清除自由基对磁敏感性的影响:提出的自由基对的自旋动力学模拟
虽然对弱磁场(如地磁场)的磁敏感性,由可能负责鸟类导航的自由基对表现出来,已经通过自旋动力学模拟进行了研究,但对其他物种中提出的自由基对的这种行为的理解是有限的。例如,这些包括单细胞绿藻莱茵衣藻(CraCRY)和Columba livia (ClCRY4)中形成的自由基对。此外,FADH•与单电子还原环丁烷胸腺嘧啶二聚体的自由基对对弱磁场的敏感性也引起了人们的兴趣。在这项工作中,我们通过自旋动力学模拟研究了这些自由基对弱磁场的定向磁敏感性。我们发现包含偶极和交换相互作用会显著降低磁敏性,这可以通过清除自由基来缓解,正如CraCRY中的[FAD•- TyrD•]自由基对所证明的那样,但由于大的交换耦合,[FADH•T□T•-]自由基对则不会。ClCRY4 [FAD•−TyrE•]自由基对的定向磁敏性即使在没有清除反应的情况下也能经受住这种不利影响,这可能会激发进一步的实验探索。
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来源期刊
European Biophysics Journal
European Biophysics Journal 生物-生物物理
CiteScore
4.30
自引率
0.00%
发文量
43
审稿时长
6-12 weeks
期刊介绍: The journal publishes papers in the field of biophysics, which is defined as the study of biological phenomena by using physical methods and concepts. Original papers, reviews and Biophysics letters are published. The primary goal of this journal is to advance the understanding of biological structure and function by application of the principles of physical science, and by presenting the work in a biophysical context. Papers employing a distinctively biophysical approach at all levels of biological organisation will be considered, as will both experimental and theoretical studies. The criteria for acceptance are scientific content, originality and relevance to biological systems of current interest and importance. Principal areas of interest include: - Structure and dynamics of biological macromolecules - Membrane biophysics and ion channels - Cell biophysics and organisation - Macromolecular assemblies - Biophysical methods and instrumentation - Advanced microscopics - System dynamics.
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